Gene Pnuc_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0360 
Symbol 
ID5052464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp355443 
End bp356207 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content50% 
IMG OID640470511 
Producthypothetical protein 
Protein accessionYP_001155144 
Protein GI145588547 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTAA CCGGCGCTGG AGGCGGAATA CTATCCGTCC CCCTGCTGGT TTTTGCACTT 
CATCTCACTG TTGCTGAGGC TGCACCAATT TCGCTTTTAG CTATTGCACT TGCTGCTGGG 
GTGGGCGCAC TACTCGGGTT TAAAAATAAA ATTCTTCGTT ATAAAGCTGC CGGGTTCATG 
GCCATCTTTG GCCTATTACT ATCACCCCTT GGTCTGTGGT TGGCGCAACG CATACCTAAT 
GCCCCTCTAT TGATTCTTTT TAGCGGCATT CTGTTTTACG TTTCCATCCG TCTTTATCTA 
CAGGCGCACA GAAAAATATT AGGCGTACCT GAGAAAGAAA GTAAACCAGC ACCCTGTCTT 
CTAAACACCT CCATCGGAAA GCTCGATTGG AATCTTCCCT GTGCAAAAGC CTTGATGCTT 
TCTGGGGCGA CTGCTGGATT TTTATCGGGA CTATTGGGCG TGGGCGGTGG ATTTGTATTG 
GTGCCAGCCC TAAGGCGATA CACCGATCTC TCAGCACAAT CTATTGTGGC CACTTCCTTA 
GGCGTGCTTG CCATTGTGTC TGGCGGAGGT GCCGTATTTT CAGCGGTATC CGGCTCCCTC 
CACATCTTCG TAGCCGCGCC ATTTGCTCTG GGGGCTTTAG GTGGGTTGCT TATTGGCAGA 
GTGATCGGCG GAAAAATCAG CGGACCTAGG CTTCAGCAAG TTTTTGCCAT CATGGCGTTT 
TGCGTAGCAA TCAGCCTGAT CATTAAAGGC GGGAACGCCT TGTGA
 
Protein sequence
MGLTGAGGGI LSVPLLVFAL HLTVAEAAPI SLLAIALAAG VGALLGFKNK ILRYKAAGFM 
AIFGLLLSPL GLWLAQRIPN APLLILFSGI LFYVSIRLYL QAHRKILGVP EKESKPAPCL 
LNTSIGKLDW NLPCAKALML SGATAGFLSG LLGVGGGFVL VPALRRYTDL SAQSIVATSL 
GVLAIVSGGG AVFSAVSGSL HIFVAAPFAL GALGGLLIGR VIGGKISGPR LQQVFAIMAF 
CVAISLIIKG GNAL