| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0357 |
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| Symbol | |
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| ID | 5052562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 352117 |
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| End bp | 354048 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470508 |
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| Product | ABC transporter related |
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| Protein accession | YP_001155141 |
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| Protein GI | 145588544 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAT TGAAGTCGCA TATCCCTCTA TTAATTGCAA TAGTCGGTCT ATTTTGTTTG
CCGCTATTTA TTCACAACCC GTATTACATT CACCTTGCTG AAACCATTCT GATCTATACG
ATCTTGTTGT TTGGTTTGGA TATTGTGGTG GGTTATGTCG GTCAAGTATC TCTAGGCCAT
GCTGCCTTGT TTGGTATTGG CTCATACACC GCAGGTATTA TGTTCTTCCA TTTAGGTCTG
CCTATCTGGG CTACGATCCC AGCTTCTGTG ATCGTTACTG CTTGCTTTGG TGGTCTATTG
GCTTTACCGG CCCTGAAAGT AGTCGGTCCA TACTTAGCGA TGGTGACCTT GGCTTTTGGA
ACGATTGCCC AGATCTTGAT CAACGAAATG ACTTGGTTAA CTGAAGGCCC ATTGGGTATT
AAGTTAACTC GTCCAGAGCT TATGGGCGTG CCGATGACTA AGGCTGAGTA TTTCTGGTTG
GTCTCCATTG TGACTATCCT TGCCTTAATC GTCATTGACC GTTTCGTTAA ATCCCAAATG
GGTCGTGCAT TTGAAGCTTT GCGTGATAGC CCAGTAGCTT GCGACTGTAT GGGTGTTTCT
GTGTATCGCT TCAAAGTGAT CGCTTTTGTG ATCAGTGCTG GCTTTGCTGG TTTGGCAGGT
TGCTTGTATG CCTACTCAGA GCAATACATC TCCCCAAATA CCTATAACAA TGAGTTAGCA
GTTCTGTTCT TGTTGGGCAT CATTATGGGC GGACGTAAGT CACGCTTAGG TGCGGTGATT
GGTGCAGCGA TTATTGTGTT GTTGCCGAAG TTGCTAGACG ATATCAATGC TTTCCGTATT
GTTGCTTCTA TCATTGCTAT CGTAGTTACT GCTGGCGCCA TTTTGGCCCT CTCTAAGAAA
GTCACTACTC CAAAGCGCGT GGCTATTCCA TTGGCTGGCG TGATCGGTTT AGCCGTATTC
TCATTCTGGC TCGATAGTAT TTCTGACTGG CGCTTGAGTA TTTTCGGCTT CATGATCCTG
TTGGTGGTGT ATTACTTGCA AAACGGTATC GTTGGCTTTG CAAAGAGCTT CTATCACTCG
ATCGTTGGCA AGACTAAAAC CGTTCGTGGC GGCGATGCTG AACTAGTGGA TGACTCCATT
AGCTTTATTA GCGCAGTCGG CAATCAAAAT TCTGGTGCTG AGCTCTTGAA GGTAGATTCA
GTATTGATGC AGTTCGGCGG CTTAAAAGCG CTGAACAATG TTGATCTGAG CATCAAGCGC
GGCACCATTC ACGGCTTGAT TGGTCCTAAC GGCTCTGGTA AGAGCACGAT GATGAACGTG
TTGACGGGTA TCTACGTTCC GACGGCTGGT AATGTTTTGT ATGCTGGTCA GAGCGTCGTT
GGCAAGACCT CTTCAGACAT TGCTTTGTCA GGTATTGCAC GCACCTTCCA AAACGTTCAG
CTCTTTGGTG AAATGACAGC CATCCAAAAT ATTTTGGTTG GCTTACATCA CACTTTTAAG
TCCAATATCG TAGAAATTGC TCTCCATTTA CCGCGCTACA AAAAAGAAGA GGCTGAGGCG
CATGCTCGTG CAATGGCTCT CTTGAAGTTT GTTGGCTTGG ATGATTTAGC AAACGAAGAA
GCACGTAACT TGCCATATGG TAAACAACGC TTACTCGAGA TTGCTCGCGC CTTGGCGTTG
GATCCAGAAT TACTCCTCTT GGATGAGCCA GCAGCAGGTT TGACGGCACC GGACATCAAA
GAACTCTTAC GCATTATTCG TAAGATTCGC GATAACGGCA TTACCTTTAT CTTGATTGAA
CATCATATGG ATGTGGTGAT GTCAGTGTGT GACACAGTCT CTGTATTGGA CTTCGGTCAG
AAGATTGCAG AAGGTAAGCC AGCTGAAGTT CAGACTAACG AGAAGGTGAT TCATGCCTAC
TTGGGTACTT AA
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| Protein sequence | MMKLKSHIPL LIAIVGLFCL PLFIHNPYYI HLAETILIYT ILLFGLDIVV GYVGQVSLGH
AALFGIGSYT AGIMFFHLGL PIWATIPASV IVTACFGGLL ALPALKVVGP YLAMVTLAFG
TIAQILINEM TWLTEGPLGI KLTRPELMGV PMTKAEYFWL VSIVTILALI VIDRFVKSQM
GRAFEALRDS PVACDCMGVS VYRFKVIAFV ISAGFAGLAG CLYAYSEQYI SPNTYNNELA
VLFLLGIIMG GRKSRLGAVI GAAIIVLLPK LLDDINAFRI VASIIAIVVT AGAILALSKK
VTTPKRVAIP LAGVIGLAVF SFWLDSISDW RLSIFGFMIL LVVYYLQNGI VGFAKSFYHS
IVGKTKTVRG GDAELVDDSI SFISAVGNQN SGAELLKVDS VLMQFGGLKA LNNVDLSIKR
GTIHGLIGPN GSGKSTMMNV LTGIYVPTAG NVLYAGQSVV GKTSSDIALS GIARTFQNVQ
LFGEMTAIQN ILVGLHHTFK SNIVEIALHL PRYKKEEAEA HARAMALLKF VGLDDLANEE
ARNLPYGKQR LLEIARALAL DPELLLLDEP AAGLTAPDIK ELLRIIRKIR DNGITFILIE
HHMDVVMSVC DTVSVLDFGQ KIAEGKPAEV QTNEKVIHAY LGT
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