Gene Pnuc_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0350 
Symbol 
ID5052742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp344667 
End bp345245 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content43% 
IMG OID640470501 
Producthypothetical protein 
Protein accessionYP_001155134 
Protein GI145588537 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0787888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC TCAACACGAC GCAATTAAAT GAAATCCGCA GCAAAGTATT AGGCGCAGCC 
GGCAAAGTTC CAGGCGCCCT TATTGGCCTA GGCATTCTAT TCATCATTCT TGGCATGATC 
GGTATTTCTG GTCAAATCTT GTTCTCATTC ATTTCTATTA ATGTTTTGGG CATTTTTCTG 
TTTGCCGGTG GTGTATTGCA AGGTGTTCAT GCATTTCAAT CTAAGGGTTG GAAGAGCGTT 
AGCATTCAAA TAGCTTTTGC TGTTTTGTAT ATTGTTGCTG GTCTCTACAC ATGGGCATTC 
CCATTGCCAG CGCTTGAAGC AATTACTTTA TGGCTAGCTG CAATTTTCTT TATCACAGGT 
TTCTTGCGTT TAGTTTCTGC TTTCCAACAT CGTCAGTTTG CTGAGTGGTT CTGGTTGGCA 
TTGTCAGGCG CGATCTCCAT CTTGATGGGC TTTCTCATCA TGAACAGCTG GCCAGCTTCA 
AGCTTGTGGT TGCCTGGTTT GTTGATTGCA ATCGAATTAC TCTTGCAAGG CTGGTCTTTA 
TTATTCCTTG GTTTTGCAGC ACGCTCTATT ACTAAGTAA
 
Protein sequence
MTELNTTQLN EIRSKVLGAA GKVPGALIGL GILFIILGMI GISGQILFSF ISINVLGIFL 
FAGGVLQGVH AFQSKGWKSV SIQIAFAVLY IVAGLYTWAF PLPALEAITL WLAAIFFITG 
FLRLVSAFQH RQFAEWFWLA LSGAISILMG FLIMNSWPAS SLWLPGLLIA IELLLQGWSL 
LFLGFAARSI TK