Gene Pnuc_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0346 
Symbol 
ID5052850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp341589 
End bp341966 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content46% 
IMG OID640470497 
ProductXRE family transcriptional regulator 
Protein accessionYP_001155130 
Protein GI145588533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.963353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCT CCACTCAATT TAAGCCTATT TCAAGCCCTG CTTCGGTTTT GGCGAAGGCG 
GTGACTCGTG CTGCAGATCG GCTTGAGATA TCACATGCTT TATTGGCGCG GATTTTGGGT 
TTAAGTCCCA CCTCTATTAC TCGCCTATAT CAAGGGGGGT ATGTCTTAAG GGAAGGTAGC 
AAAGAATGGG ATTTTTCGCT GCTTTTTATT CGCCTATATC GCTCCTTAGA TTCAATTGTC 
AGTGATGACG CTGTAGCAAA ACAATGGCTT CAAAGCGAGA ACTTGGGTTT ACATGCCCAA 
CCCATTTCAT TAATTCAGAC TACGGAGGGA TTAGTACGTG TCGTTCAATA CTTGGACTCC 
TCACGCGGTA TCGTCTAA
 
Protein sequence
MTASTQFKPI SSPASVLAKA VTRAADRLEI SHALLARILG LSPTSITRLY QGGYVLREGS 
KEWDFSLLFI RLYRSLDSIV SDDAVAKQWL QSENLGLHAQ PISLIQTTEG LVRVVQYLDS 
SRGIV