Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0312 |
Symbol | |
ID | 5053719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 303045 |
End bp | 304208 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640470464 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_001155097 |
Protein GI | 145588500 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.991338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAA TTCCAGTCTA CCAACCATCG CTATCTGGAA ATGAAAAGAA ATATGTGTTG GACTGTCTAG AGTCGACATG GATATCCTCT AAAGGCGCTT ATTTAAGTAA ATTTGAAGAT GCATTTGCTC AAAAGATTAA TGTAAAGCAT GCCACTGCCG TTTCAAATGG AACGGTTGCC TTGCATCTCG CTTTGCTTGC ATTGGGGGTA GGCCCTGGTG ATGAGGTCAT TGTTCCGACT CTAACTTATA TAGCTTCTGT GAATGCAATC CGCTACGTTG GTGCCACCCC TATTTTTGTC GATTCACTGA GGGACACATG GCAGGCCGAT CCCGCTGATA TTGAAAAAAA GATTACCTCT AAGACTAAGG CAATTCTGCT GGTGCATCTA TATGGTCATC CATGCAATAT GGATGAGGTG ATGCGTATCG CCAAGCAGCA TGGTGTTTAT GTTATTGAAG ATGCTGCAGA AGCATTTGGG TCAAAGTATC GTGATGTATG TGTCGGCGCT ATTGGAGATA TCGCAACTTT CAGCTTCTTT GGCAATAAAA CCATCACCAC TGGCGAGGGG GGAATGGTTG TGACCAATGA TCAGACTTTA ATTGACAGGG TAAAACACCT TAAGGGGCAG GGGCTCGCAA CTCACAGGCA ATATTGGCAT GATGTTGTTG GATACAACTA TCGCATGACT AATATTTGTG CAGCAATTGG TTTGGCTCAG CTTGAGCAGG CAGATCAGTT CATTGAGCAA AAACGAAATG TAGCTAATTT ATATAAAAAA TACTTAAAAG ATCTTCCGGT TGAAATTCAA GAAGAAGCGC CCGATGTCTT TCACACTTAT TGGATGTTCT CGATTCTGGT TGCGGATGCG AAAATACGAG ATCAGTTAAG GGATTATTTG CTAGAAAGAG GCATTGAAAC CCGACCTTTG TTCTATCCCG TACATACAAT GCCAATGTAT AGCACTCCAT TTCAGTCGCA CAAAGTTGCA GAGGATTTAG GATGGCGCGG CATAAATCTT CCAAGCTATC CAGGCCTTCA AGAGAGTCAG ATCATTAAGG TATGTGATTG CATTAAAACC TTTTTGGGCA AAAGACAAAA TAATCTGTAT CGCAATAGAG CTGAGATTGC AGCCGTTCCC ATTAGGTGCA ATAAACAAAA TTGA
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Protein sequence | MIEIPVYQPS LSGNEKKYVL DCLESTWISS KGAYLSKFED AFAQKINVKH ATAVSNGTVA LHLALLALGV GPGDEVIVPT LTYIASVNAI RYVGATPIFV DSLRDTWQAD PADIEKKITS KTKAILLVHL YGHPCNMDEV MRIAKQHGVY VIEDAAEAFG SKYRDVCVGA IGDIATFSFF GNKTITTGEG GMVVTNDQTL IDRVKHLKGQ GLATHRQYWH DVVGYNYRMT NICAAIGLAQ LEQADQFIEQ KRNVANLYKK YLKDLPVEIQ EEAPDVFHTY WMFSILVADA KIRDQLRDYL LERGIETRPL FYPVHTMPMY STPFQSHKVA EDLGWRGINL PSYPGLQESQ IIKVCDCIKT FLGKRQNNLY RNRAEIAAVP IRCNKQN
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