Gene Pnuc_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0307 
Symbol 
ID5053822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp297315 
End bp298223 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content42% 
IMG OID640470459 
Producthemolytic protein hlpA-like protein 
Protein accessionYP_001155092 
Protein GI145588495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAAT TGAATTCCCC GGTCGTCTTT GTCATATTCA ATAGACCAGA TAAAGCTAGA 
GTTACCTTTG AGGCGATTGC GAAAGCTAGA CCAAAAAAGC TTTTGATAAT TGCAGACGGC 
GCACGTACCA ATGTAGTTGG GGAGCATCAA AAATGCCTAG AGACGCGTGC GATTATTGAT 
CGCGTCGATT GGGATTGCGA AATTCTCACT AATTTCTCCG ATATTAACCT TGGGTGCAAG 
ATGAGGCTTG CGACAGGTCT TGATTGGGTA TTTCAAAATG TGCCAGAAGC AATTATTTTG 
GAGGATGACT GCCTGCCTGC GCCTGAATTT TTTCAATTTT GTGATGAGCT CTTAAAGCGC 
TATCGATTTG ATGATCATGT TGGAATGATT TCTGGATGCA ACTTTCAAGA GGGAATCAAA 
AGGGGGGATG CAGATTATTA CTTTAGTCAG TTTTGTCATA TCTGGGGTTG GGCAACATGG 
GCTCGTGCCT GGCAAAAATA TGACGTTCAG ATGAGTGCAT GGCCGCAGCT GAAATCTGCT 
GGGTGGTTAA ACGACCTCGG CCTTTCTGGG TCTGAGCAAA GGCATTGGGA AAAGTCTTTT 
GATAAGGTTT ATTTTCAAGG TCTAGATACC TGGGATCATC AGTGGACGTT TGCTTCTTGG 
AAAAATAAGA TGATTTCTAT AATGCCCAAC ATCAATCTCA TCAGTAATAT TGGGTTTGGT 
GTGGGTGCAA CACATACACA AGGTCGAAGT ATTTTTTCAA ATATCCCGAC AGGTACTCTT 
AGGTTTCCAA TGACGCACCC AAGTAAGGTT GAAGCTAATA AAGAAGCCGA TGGGTTTACT 
GCCAAGCACC AGTTTACAGA TTCCTATTTA TGGAAAATCT ATAGAAAACT TAGGGCATAT 
CTGCGTTAA
 
Protein sequence
MYQLNSPVVF VIFNRPDKAR VTFEAIAKAR PKKLLIIADG ARTNVVGEHQ KCLETRAIID 
RVDWDCEILT NFSDINLGCK MRLATGLDWV FQNVPEAIIL EDDCLPAPEF FQFCDELLKR 
YRFDDHVGMI SGCNFQEGIK RGDADYYFSQ FCHIWGWATW ARAWQKYDVQ MSAWPQLKSA 
GWLNDLGLSG SEQRHWEKSF DKVYFQGLDT WDHQWTFASW KNKMISIMPN INLISNIGFG 
VGATHTQGRS IFSNIPTGTL RFPMTHPSKV EANKEADGFT AKHQFTDSYL WKIYRKLRAY 
LR