Gene Pnuc_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0298 
Symbol 
ID5053620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp288821 
End bp289633 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content46% 
IMG OID640470450 
Productintegrase catalytic subunit 
Protein accessionYP_001155083 
Protein GI145588486 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGTTA TTTTGCTGGC AGCCCAAATG CCTAAAAGCG TGTATTACTA CTGGCAAAAA 
GCCAGTAGTA ATACTGACCC CCATGCCAAT GCCAAGATCG AGATCAAGGC CATCTTCAAT
ACCCATCAGG GTCGCTATGG CTACCGGCGA GTCCATTTAG AGCTTCGCAA TCGGGGGCAA
TACCTCAATC ACAAGACAGT ACAAAAGCTC ATGGGGCAAC TTGGACTCAG GTCTATGGTT
AGGCCTAAGC GCTATCAGTC CTACAAAGGA GGGGTTGGTA AGGCGGCCCC CAATTTGCTA
GAGCGCAACT TTAGAGCAAG TAAACCGAAT CAAAAATGGG TCACTGATGT AACGGAGTTC
AGCATCAGGG GGCAAAAGGT CTATCTCTCA CCCATCCTAG ACCTTTATAA CCAAGAGATC
ATCTCGTATG AGATTGGTGA TCGGCCTCAA CTGAGTATGG TGACTACCAT GCTTAGCAGC
GCTTTTAAAC ATCTCAAGCA GGCTGATAAG CCGATGCTGC ACTCAGACCA GGGCTGGCAA
TATCAGATGG GGTTTTATCA ACAAGCCTTA AAGAAACAAG GTGTTACTCA AAGCATGTCT
AGAAAAGGTA ATTGCTTAGA TAACGCCGTG ATGGAGAACT GGTTTGGGAT TATGAAAACC
GAGTTCTTCT ATCCGAAGAG GTTTGAGACT ATTGAATCAT TTAAACAAGG GCTGCATGAA
TATATCCACT ACTACAACCA TGATCGGATC AAACAAAAAC TAAAAGGATT GAGTCCGGTG
CAATACCGAA CTCAATCCCT CGTGCTAACC TAG
 
Protein sequence
MQVILLAAQM PKSVYYYWQK ASSNTDPHAN AKIEIKAIFN THQGRYGYRR VHLELRNRGQ 
YLNHKTVQKL MGQLGLRSMV RPKRYQSYKG GVGKAAPNLL ERNFRASKPN QKWVTDVTEF
SIRGQKVYLS PILDLYNQEI ISYEIGDRPQ LSMVTTMLSS AFKHLKQADK PMLHSDQGWQ
YQMGFYQQAL KKQGVTQSMS RKGNCLDNAV MENWFGIMKT EFFYPKRFET IESFKQGLHE
YIHYYNHDRI KQKLKGLSPV QYRTQSLVLT