Gene Pnuc_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0293 
Symbol 
ID5053961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp285601 
End bp286233 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID640470445 
Producthypothetical protein 
Protein accessionYP_001155078 
Protein GI145588481 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTGA CCTTAGATCT TTTACTCATT CCGCTAGCCT ATCTGATTGG TTCCATCTCA 
TTTGCGGTGG TGGTGAGTAA ATGCATGCGT TTGCCCGATC CTCATACGTA TGGCTCTGGT 
AACCCTGGTG CCACCAATGT TTTGCGTACG GGCAATAAGA AGGCTGCTGT ACTCACTTTA 
ATTGGCGATG CTTTAAAAGG TTACTTTGCA GTCATGTTGG CCCGCCATAT TTTGGGAGAC 
CAATCGCTAA CAGCCAGTTT AAATTCTTGG CTTTTATGTG GTGTAGTAAT CGCAGTATTT 
TTGGGGCATC TATTCCCAGT CTTTCATGGC TTTAAAGGCG GTAAGGGCGT TGCTACAGCT 
TGCGGTATCT TATTTGGCAT TAATTGGATA TTGGGCTTAG CTACGCTAGC GACTTGGATC 
ATCGTTGCTA AATTTATGCG TTACTCCTCT TTGGCTGCTA TTGCTGCTGC CATATTTGGC 
CCAGTCTATT TTGTGTTCTT GTTTGGCTTT CAGCCAATGG GCATTGCGCT ACTGATTGTT 
TGCTTCTTAT TAATTTGGCG TCACCATAGC AATATTCAAA ATTTAATGAA TGGCACAGAA 
AGCCGCATCG GCTCCAAGAA AGAGACCCAA TAA
 
Protein sequence
MTLTLDLLLI PLAYLIGSIS FAVVVSKCMR LPDPHTYGSG NPGATNVLRT GNKKAAVLTL 
IGDALKGYFA VMLARHILGD QSLTASLNSW LLCGVVIAVF LGHLFPVFHG FKGGKGVATA 
CGILFGINWI LGLATLATWI IVAKFMRYSS LAAIAAAIFG PVYFVFLFGF QPMGIALLIV 
CFLLIWRHHS NIQNLMNGTE SRIGSKKETQ