| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0292 |
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| Symbol | |
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| ID | 5052972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 284636 |
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| End bp | 285553 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470444 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_001155077 |
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| Protein GI | 145588480 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACTC AGCTGCCTAT ACATCCTGCA AGCCAAGAGG CAATAGAGCG GTTTTGCGAT
GCCTGCTGGC TAGAAGATGG TTTGGCAAAA AATAGTCTTT CAGCCTATCG CCGTGACTTA
TTGCTCCTAG CCCAGTGGCT ATATCAACAG TCAGGTGTAG ATCTTTATGC GGTTACAGAA
AAAGATCTCA CTGCTTATAT AGCGCATCGC CGCGCTGATA AAGCCACTAC AGCCAATCGG
CGTTTAACGG TATTCAAGCG TTTTTATCGC CATGCATTAC GAATCAATTT AGTCAAGAGT
GATCCTTGTA TTGGACTCCG TGCAGCCAAG CAAGCATTGC GTTTCCCAAA AACATTGAGT
GAAGATCAGG TGACTGCTTT GCTTAATGCA CCCGATATTG AAACCCCATT AGGACTTCGC
GATCGCACCA TGCTCGAGCT CATGTATGCC AGCGGCCTAC GCGTTTCAGA AATTGTTTCT
CTTAAAACGG TTGCACTAGG TTTGAATGAG GGCGTAGTTC GAGTGGTCAA TGGCAAAGGT
GGCAAGGAAC GATTAGTGCC TTTCGGCGGA GAAGCAGGGC AATGGTTAAG AAGGTATCTA
GCGGAAGCGA GAACGCCATT GCTCGAGGGA AAAACAACTG ATGCGGTATT TGTGGGTCGA
CACACTGGCA CGGGGCTTAC CCGTCAAGCA TTTTGGGCGC TCATTAAGCG CTACGCGACC
GTAGCCAATA TTCCTGTCGC TTTATCACCT CATACCCTCA GGCATGCTTT TGCCACCCAT
TTGCTGAATC ATGGAGCGGA TTTAAGGGTG GTGCAGCTAT TGCTTGGGCA CGCCGATATC
TCCACTACCC AAATCTATAC CCATGTCGCC AGAGAGCGCC TGAAATCCAT TCATCAGCAA
CATCACCCTC GCGGCTAG
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| Protein sequence | MATQLPIHPA SQEAIERFCD ACWLEDGLAK NSLSAYRRDL LLLAQWLYQQ SGVDLYAVTE
KDLTAYIAHR RADKATTANR RLTVFKRFYR HALRINLVKS DPCIGLRAAK QALRFPKTLS
EDQVTALLNA PDIETPLGLR DRTMLELMYA SGLRVSEIVS LKTVALGLNE GVVRVVNGKG
GKERLVPFGG EAGQWLRRYL AEARTPLLEG KTTDAVFVGR HTGTGLTRQA FWALIKRYAT
VANIPVALSP HTLRHAFATH LLNHGADLRV VQLLLGHADI STTQIYTHVA RERLKSIHQQ
HHPRG
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