Gene Pnuc_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0286 
Symbol 
ID5053373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp279304 
End bp279942 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID640470438 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001155071 
Protein GI145588474 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTCAA TCTTACTATC TGCCGGTTGG CCCATTTGGC CTCTTTTGAT CATCTCTATT 
ATCGGCCTAG CGATTGTGAT TGAGCGTAGC TGGTACCTGC GCCAAATTCA TATTTTTCCA
AAGGGTAGTC TAGAACTCAC TTTTGGCATG TGCAATCAGA TCGCCAACCA AAAAAACGTT
TCTGAAGCCC AAGTTACCGA ATTAGCACAG CTTTCTCCAG CCACTCCTTT GTTTGCCTGT
GTATTAAAAG AAAAGCTTAG TGGTAGTAGT GCTGCTGTCG CACTAGAAGA ACTACAAGCA
CTTGCACAGG CTACTTGGTT AAAACTTGAT CGTTATCTAG GTGCGCTGGC TACCATTGCT
ACTGTTGCCC CTCTATTAGG TTTATTTGGC ACAGTAGTAG GCATGATTGA AATCTTTGGC
AGTCAAGGGG CAGTCAATGG CGTAGCGGGC AGCCCACAAG AACTTGCGCA CGGCATCTCA
GTAGCGTTGT ACAACACAGC CTTTGGTTTA CTCATTGCTA TTCCTGCTTT AGCCGCATGG
CGCGGTTTAC GCGCAATGGC AAATCAGCGT CAACGTGAAT GCGAAGAGTT CACCCGTCAA
TTATTCAAAA AACTCTATCC AAGTGATGCT GCGCAGTAA
 
Protein sequence
MYSILLSAGW PIWPLLIISI IGLAIVIERS WYLRQIHIFP KGSLELTFGM CNQIANQKNV 
SEAQVTELAQ LSPATPLFAC VLKEKLSGSS AAVALEELQA LAQATWLKLD RYLGALATIA
TVAPLLGLFG TVVGMIEIFG SQGAVNGVAG SPQELAHGIS VALYNTAFGL LIAIPALAAW
RGLRAMANQR QRECEEFTRQ LFKKLYPSDA AQ