Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0272 |
Symbol | |
ID | 5053170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 268640 |
End bp | 269380 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470424 |
Product | exsB protein |
Protein accession | YP_001155057 |
Protein GI | 145588460 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.281019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCGT TATCAGCTGC ATATCAAAAT CTAGCGCCAC GTAAAGATGG CGCGCCAGCT GTTATTTTAT TTTCTGGTGG TCTAGATTCC ACTACGGTTC TAGCTCTTGC AAAAGATTTG GGTTACACCC CTTATGCGCT CTCCGTAGGC TATGGTCAGC GTCATTCATC TGAATTAGCT GCTGCTAAAC ATATCGCCAA GCAAATTGGT GTCGCTCGTC ATGAGGTGGT AAATTTAGAT TTAACCCGCT TTGGTGGCTC AGCCTTAACT GACTCATCCA TTGCCGTTCC TACGACCCCA GGCAAAGATC AAGAGATCCC TGTCACTTAT GTCCCTGCGC GTAATACGAT TTTGCTATCA CTTGCTTTAG GATGGGCTGA ATCACTAGGT GGCTTAGATG TGTTTTATGG GGCTAACTCA GTGGATTACT CGGGCTATCC AGATTGCCGT CCCGAGTATG TAGCCTCTTT TGAAACCATG GCTAATCTAG CAACTAAGGC CGGTGTTGAG GCCATTAATA ATGAAAATCG CTTTCGGGTA CACGCCCCGA TCATCAGCTT AACTAAGGCT GAGATTATTC AACTAGGCAG CACGCTTGGG GTAGATTACT CGCAAACAGT ATCGTGCTAT CAAGCCAATG ACTTAGGTGA AGCTTGTGGT GAATGTGAAT CTTGTCGCCT TAGGCAAATT GGCTTTAAGC AGGCCAATGT GATTGACCCA ACTCGCTATC AAAAAAAATA A
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Protein sequence | MSSLSAAYQN LAPRKDGAPA VILFSGGLDS TTVLALAKDL GYTPYALSVG YGQRHSSELA AAKHIAKQIG VARHEVVNLD LTRFGGSALT DSSIAVPTTP GKDQEIPVTY VPARNTILLS LALGWAESLG GLDVFYGANS VDYSGYPDCR PEYVASFETM ANLATKAGVE AINNENRFRV HAPIISLTKA EIIQLGSTLG VDYSQTVSCY QANDLGEACG ECESCRLRQI GFKQANVIDP TRYQKK
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