| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0271 |
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| Symbol | |
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| ID | 5052107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 267995 |
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| End bp | 268612 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470423 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_001155056 |
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| Protein GI | 145588459 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.800098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTACAG GAATCATTAC TGCCGTAGGT CAAATCAAAA GCACCCAACC CAAGGGCGAT
GGCTTACATT TGGTCGTTGA GGTGCCAGAC GGCTATTTGG ATGACGTTGC TTTGGGCGAT
AGCATTGCGA TACAGGGTGC CTGTATGACG GCAACGAATT TTGAGGGCAA TACTTTTGCG
CTTGATATTT CTCGAGAGTC TTTAAATAAA ACGATTGGCC TAGACAAAAC AGGTCCAGTG
AATCTCGAAA AAGCACTCCG TTTAAATGAT CGCTTGGGCG GTCATTTGGT GAGCGGGCAC
GTAGACGGCG TTGGAAAAGT GACTCATTTT TCGCAAGTAG CAAATGATGC CTATGGCTCA
TGGCTACTGC GAATAGAGGC ACCTAAATCT TTAGCGGGGT TTTTGGCTTA TAAGGGCTCG
ATCGTAGTCA ACGGCGTTTC TTTGACGGTC AATAAAACAG CAGACAGTGC CAGTGCTTGT
GTTGTTGATA TCAACCTCAT TCCTCATACC TTACAAAGCA CCACCCTGGG TATGTTAAGG
CAAGGTGATG CAGTGAATCT TGAGGTGGAT TTAATTGCGC GTTATGTTGC ACGTATGCTT
GAAACTCAAG CAAAGTAA
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| Protein sequence | MFTGIITAVG QIKSTQPKGD GLHLVVEVPD GYLDDVALGD SIAIQGACMT ATNFEGNTFA
LDISRESLNK TIGLDKTGPV NLEKALRLND RLGGHLVSGH VDGVGKVTHF SQVANDAYGS
WLLRIEAPKS LAGFLAYKGS IVVNGVSLTV NKTADSASAC VVDINLIPHT LQSTTLGMLR
QGDAVNLEVD LIARYVARML ETQAK
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