| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0257 |
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| Symbol | |
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| ID | 5053374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 255216 |
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| End bp | 256244 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470409 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_001155042 |
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| Protein GI | 145588445 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.36453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAGCT TGCCCCCCAA AATCCTGCTA GTAAAGCTTT CCTCCTTGGG GGATGTGCTT
CACAATTTAC CGATTGTGTG GGACATACGA GCTCGTTTGC CAGATGCGCA AATTGACTGG
GTGGTTGAAG AGGCTTACGT TCATTTGTTG CAACCTCTTC TGAGTCGAGG AAATTTCAAA
GGGATTGACC GAATCATTCC TTTTAGCTTA CGTCGATGGA AAAAATCATT ATTCAGTTTG
ACCTCTTGGA GGCAATTCTT TTCCTTTAAA AAAGAGCTCC AAAAGGTTAC GTACGATGTT
GTTATCGAAA CCCAAGGCTT ATTAAAGTCC GCTTTTGTTT GCGCGCTAGC CAAAAAGACA
TCCGACGCAG TAGTTGCTGG CCTGGCGAAT GCTACTGAGT ATTCGGGTTA TGAACCACTA
GCCAGGTTGT TTTACAACCA GTCTGTACAG GTGCCATTTC AGTGTCATGC AGTAGACCGC
TCTCGTTATG TTCTCTGTTC CGCACTAAAT TGGCCATTAA TCAATCGTGA TGAGCGAGCC
CAGTTTTATC CGTCGAGCTA CGTTGATGCA GTCTTACACC AATCACCCTC GAACTTTAAA
TCGCCCTATA TTCTTTTCTT TCATTCGACT GCGCGAGAGG CAAAACGCTG GTCTAACGAG
AACTGGATTT ACTTGGGGAA TGAGTTGGCC GGCCAAGGTT ATCAGGTCAT TCTTCCATGG
GGTAATGCTA GTGAGAAAGT GGTGAGTAAT GAGCTGGCAA GCAAAATAAA AGGCGCCATG
GTTCCCAAAC CATTTTCCGT GCAAGAAGCC TTTTTGATTG TTGGGAATGC AGCTTTAGTG
GTTGGGGTAG ATACAGGCCT TACACATTTA GCGGCGGTAA TGAATAAGCC AACCATTGAA
ATTTATTGCG ATTCACCACG TTGGAAAACT GAAGGGTATT GGTCAAACCA CATTCGTAAT
GTGGGTGATA TTCAGGATCC CCCATCAGGT GCTGTGGTTT TAGCCGCTGC TACAGAGTTG
CTGCAGTAA
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| Protein sequence | MKSLPPKILL VKLSSLGDVL HNLPIVWDIR ARLPDAQIDW VVEEAYVHLL QPLLSRGNFK
GIDRIIPFSL RRWKKSLFSL TSWRQFFSFK KELQKVTYDV VIETQGLLKS AFVCALAKKT
SDAVVAGLAN ATEYSGYEPL ARLFYNQSVQ VPFQCHAVDR SRYVLCSALN WPLINRDERA
QFYPSSYVDA VLHQSPSNFK SPYILFFHST AREAKRWSNE NWIYLGNELA GQGYQVILPW
GNASEKVVSN ELASKIKGAM VPKPFSVQEA FLIVGNAALV VGVDTGLTHL AAVMNKPTIE
IYCDSPRWKT EGYWSNHIRN VGDIQDPPSG AVVLAAATEL LQ
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