Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0253 |
Symbol | |
ID | 5053848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 251688 |
End bp | 252746 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640470405 |
Product | dTDP-glucose 4,6-dehydratase |
Protein accession | YP_001155038 |
Protein GI | 145588441 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.430028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAG TAACCGGTGG TGCTGGCTTT ATTGGAGGGA ATTTTGTATT GGATTGGTTG GCTAACTCCA ATGCTGAAGG AATAGTCAAT TTAGATAAAT TAACTTATGC CGGCAACCTG GCTACCCTCG ATTCACTCAA AGATGATGCT CGCCATGTAT TTATTCATGG TGATATTGGT GATAAAGAGC TTGTAACAAA ACTACTAACT CAATATAAAC CCCGAGCCAT CGTAAACTTT GCGGCTGAAA GCCACGTGGA TCGCTCTATT CATGGGCCGG CAGAATTTGT GCAAACCAAT ATTGTGGGTA CTTTTAATCT GCTCGAGTGC GCTCGCGAAT ATTGGAACTC ATTAGATGGT GCTGAAAAAG AGCAATTTCG TTTTCATCAT GTTTCAACCG ATGAGGTTTA TGGCTCACTC TCAGCAGCAG ATCCTGCGTT TACTGAGACC AATTCCTATG AGCCTAATAG CCCATACTCT GCCTCAAAGG CTGCTTCTGA TCATCTAGTG CGCGCCTGGT TTCATACCTA TAGCTTCCCT GTGGTGACCA CCAATTGCTC GAATAACTAC GGACCTTATC ATTTCCCCGA AAAATTAATC CCATTGGTCA TTTTGAATGC ACTCAATGGC AAGCCTTTAC CTATTTACGG TGATGGCCAG CAAGTGCGAG ATTGGCTGTA TGTTGGTGAT CACTGCTCTG CAATTCGTGA AGTTTTAGCT AAGGGCAAGT TGGGAGAGAC CTATAACATT GGCGGCTGGA ATGAAAAAGC CAATATTGAT GTGGTGAAAA TAATTTGCCA AATATTAGAC CAGCTAAAAC CAAGGGCTGA TGGTAAATCT TATGCTGAGC AAATTACCTT TGTAAAAGAT CGGCCAGGGC ACGATCGTCG CTATGCGATT GATGCTAGTA AAGTCGAGCG TGATTTAGGC TGGCGTCCAG CAGAGACCTT TGACACTGGT ATCCGTAAAA CGGTGCAGTG GTATCTCGAA AATCCAGCAT GGATCGAAGG CGTAGTGAGT GGTTCATACC GTGACTGGTT GCAAAAGCAG TACAACTAA
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Protein sequence | MILVTGGAGF IGGNFVLDWL ANSNAEGIVN LDKLTYAGNL ATLDSLKDDA RHVFIHGDIG DKELVTKLLT QYKPRAIVNF AAESHVDRSI HGPAEFVQTN IVGTFNLLEC AREYWNSLDG AEKEQFRFHH VSTDEVYGSL SAADPAFTET NSYEPNSPYS ASKAASDHLV RAWFHTYSFP VVTTNCSNNY GPYHFPEKLI PLVILNALNG KPLPIYGDGQ QVRDWLYVGD HCSAIREVLA KGKLGETYNI GGWNEKANID VVKIICQILD QLKPRADGKS YAEQITFVKD RPGHDRRYAI DASKVERDLG WRPAETFDTG IRKTVQWYLE NPAWIEGVVS GSYRDWLQKQ YN
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