Gene Pnuc_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0251 
Symbol 
ID5053867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp249910 
End bp250854 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content44% 
IMG OID640470403 
Producthypothetical protein 
Protein accessionYP_001155036 
Protein GI145588439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00862283 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGTG TACGAATTTC GACAACTGGA TGCCCTAGCG ACTATTCGCG TGGCTTGTTT 
CCGATTATCG CTCAAAGTCT GGGCTATCAA CTTCACTGGG TGAAGCCTAC AGAGGCTGAT 
TTACTCATAT TGGGTCCCTT TTTGAACGGG GGTCGTAAGA AGCTGAGTTG GTGCCCAAAA 
CCCTTGCGTC CTACCATGCA ATCCATGATC AATCTAGTTC CAGCAAGAAA TCATGAGCCC 
CTTAGGGTTT TCCATAGCGC AGAAAATCTT CGTCATGACA CGGTGGCAAG TGATTACAGC 
ATCACCTTTG AGCTCAATAT CACCTCAAGC AATCATTTCC GACTTCCATA CTGGATGGAA 
ATGATCGATT GGTCCCATGA GGGAGTGGTC GGCAATGCAA ACCCTCGTTA TGGTCACCTC 
ATGAAAATTG AGCGCCTCAT GCAGCCACTT GGGGAGCGCT TTCTTGAAAA ACCTAAAGCC 
GCCGCTTTTT TAAGTTCACA CATTCGCGAG CCTCGAAAAA CGCTTTTTGA AGCCGTGCAG 
AAAGTAATGC CCGTAACTGG ATTTGGCGCT CATTTCAATC GGAATATTAA AAATCATCAT 
CTGAGCGGTT TTTTAAAACA AGAGCTCTTG CAAGAGTTTG GCTTTAATCT TTGTCCAGAA 
AATGGCATGT ATCCCGGCTA TTACACCGAA AAAATTCCAG AAGCCTTCTT TGCGGATTGC 
CTTCCAATTT CCTGGACTGA TGAAAATGTT AAAGTGGACT TTAACCCCAA TGCTTTTATC 
AATCTGGCTC CGATGTCATG GTGCAATTAC ACACCTTTAG CTGAAATTAT TAATACACCA 
AAACTACTCG AGGGCTATAG CTCCCAAGCC TTATTGCTTA AAGCCCCCAG CATTGAACCT 
TTTAAGAATT TCGTAAAGAA CATTCTCGAA GACGCCTGCT CTTAA
 
Protein sequence
MRSVRISTTG CPSDYSRGLF PIIAQSLGYQ LHWVKPTEAD LLILGPFLNG GRKKLSWCPK 
PLRPTMQSMI NLVPARNHEP LRVFHSAENL RHDTVASDYS ITFELNITSS NHFRLPYWME 
MIDWSHEGVV GNANPRYGHL MKIERLMQPL GERFLEKPKA AAFLSSHIRE PRKTLFEAVQ 
KVMPVTGFGA HFNRNIKNHH LSGFLKQELL QEFGFNLCPE NGMYPGYYTE KIPEAFFADC 
LPISWTDENV KVDFNPNAFI NLAPMSWCNY TPLAEIINTP KLLEGYSSQA LLLKAPSIEP 
FKNFVKNILE DACS