| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0249 |
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| Symbol | |
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| ID | 5053870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 248117 |
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| End bp | 248836 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640470401 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001155034 |
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| Protein GI | 145588437 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0819966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATA TTCAAGCTTT AGTTATCTCA TTAGCAGGAT CTGATTCTCG CCAAGAGAAG
GTCAGGGCTG AGCTTGGGAA AACTCACCTA GAATGGCGAT TTTTAGATGC GGTGAGGGGG
TCGGCCCTTG TGGAAGTTCC TGCGGAATAC AAGCCCGAGA AAGTAAAAGC CTTATTGGGG
TTTGAATTGA CTCCAAACGA ACTAGGATGT TTTTTATCGC ATAAAAAAGC TTGGCAAGAA
TGCGTAGATA AAAATATTCC AACCATTATT TTTGAAGATG ACTTTTATTT CTTGCCACAC
TTTGAAGAAG CTATACATTT TTTATCTACG CAATGCAATG ATTGGGATGC GATAAGACTT
CAAGGTTTAA GTGATGTCCC TCAGGAGTGC ATTTTAGAAA ATGGTCAAAT GAGTTTGGTT
AGGAATGTGG GGGATGCGGT GGGGGCGACG GCCTACCTTC TGAAGCCCAC CGCTGCAAAA
AAACTGATCG CTGCTTCGAA TGATATTTAT GAGCCTCTCG ATCATTTTCT TGAGCATTAT
CAGAAGCACC ATGTAGAATT TTTAGCTATC AGCCCATACC CAGTTGATAT CACTCGAGTG
CAAAGCACGA TTGCTGATAG GCCAGAGAGG TTGCCCATCA AGGGGTGGGC AAAGTTAAAG
AGATCTATTT TGCGAACACT AGATCGTCAG TTTTCTGAGA ATCCCTGGTT CCCTAAGTAA
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| Protein sequence | MSDIQALVIS LAGSDSRQEK VRAELGKTHL EWRFLDAVRG SALVEVPAEY KPEKVKALLG
FELTPNELGC FLSHKKAWQE CVDKNIPTII FEDDFYFLPH FEEAIHFLST QCNDWDAIRL
QGLSDVPQEC ILENGQMSLV RNVGDAVGAT AYLLKPTAAK KLIAASNDIY EPLDHFLEHY
QKHHVEFLAI SPYPVDITRV QSTIADRPER LPIKGWAKLK RSILRTLDRQ FSENPWFPK
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