Gene Pnuc_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0243 
Symbol 
ID5053486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp243296 
End bp243928 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content45% 
IMG OID640470395 
Producthypothetical protein 
Protein accessionYP_001155028 
Protein GI145588431 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.763394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACGG CCAATAAAGC CCCCTATGAT TCAGACCCCG GGTCTTTGAT TTCCTATTCT 
GCAGATCATT TAGCAAATCA ATTTTTGATT GCTATGCCAG GCATGGTCGA TGCCAATTTT 
GCTGGTTCAG TCATTTACTT GTTTGAGCAC AATGCCAGAG GCGCAATGGG GTTAGTAGTC 
AATAAACCTA CTGAAGTAGA TTTAGCCACC TTGTTTGACA AGATTGAACT GAAGTTAGAG 
ATAGCGCCAT TGCTCGAGCA GCCAGTGTAT TTTGGTGGCC CCGTTCAAAT TGAACGTGGG 
TTTGTCTTAC ATGAATCCAA TAAAAATCTC TCTTATAGCT CTTCCCTGAT TATTCCAGGG 
GGGTTGACAA TGACTACCTC CAAAGATGTT CTCGAAGCTG TCGCTATTGG AAATGGCCCA 
CGTAAATTCT TGATGACCTT GGGTTATGCG GGCTGGAGCG CTGGTCAGCT TGAAGAGGAA 
ATTACTTTAA ATGGCTGGAT GAATGTTCCG CTTTCACGCG AACAGATGAT GGAGATCATT 
TTCAATACCC CACCAAGTCA GCGTTATGAA AAGACAATGA ATCATCTGGG ATTTGATTTG 
TCGCACCTCT CTGGTGAGGC GGGGCATGCC TAA
 
Protein sequence
MSTANKAPYD SDPGSLISYS ADHLANQFLI AMPGMVDANF AGSVIYLFEH NARGAMGLVV 
NKPTEVDLAT LFDKIELKLE IAPLLEQPVY FGGPVQIERG FVLHESNKNL SYSSSLIIPG 
GLTMTTSKDV LEAVAIGNGP RKFLMTLGYA GWSAGQLEEE ITLNGWMNVP LSREQMMEII 
FNTPPSQRYE KTMNHLGFDL SHLSGEAGHA