| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0239 |
|---|
| Symbol | |
|---|
| ID | 5053619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 238706 |
|---|
| End bp | 240010 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640470391 |
|---|
| Product | glutamate-1-semialdehyde aminotransferase |
|---|
| Protein accession | YP_001155024 |
|---|
| Protein GI | 145588427 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.346757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAAAAC GAGATCAAAA CGAGGTTTTA TTTGAGCGTG CGCAAAAGAC GATTCCCGGT
GGCGTGAATT CTCCAGTGCG CGCCTTTCGT CAGGTGGGCG GTACACCCCG TTTTATTTCT
AAAGCAAAAG GCCCCTACTT TTGGGACGCT GAAAATAAGC GTTATATCGA CTTAATTATG
TCTTGGGGTC CCATGATTGC TGGCCATGCC AATCCTGAGG TAGTAGAAGC AGTTCAGAAG
GCAGCTGAAA CCAGTTTTAG TTATGGTGCA CCTACCGAAG GTGAAATAGA ACTGGCAGAA
CGTATTTGTG CCTTAGTGCC CAGTATTGAG CAAGTCCGAA TGGTTTCAAG TGGAACCGAA
GCGACCATGA GTGCATTACG TTTAGCGCGT GGTTATACGA ATCGCGACTT AATCATTAAG
TTTGAAGGTT GTTATCACGG ACACGCTGAT AGCTTGTTAG TAAAAGCAGG TTCGGGTTTG
CTGACCTTTG CGGACTCGAC TCAAAATGCA CCCTCATCTG GTGGTGTACC TCAAGATCTG
GTCAAGCACA CCTTAGTCTT GCCTTACAAC GATGTAGAGG CAATTGAGGC TGTGTTTAAA
AAGCAAGGCA ATGAGATTGC AGCAGTGATC TTAGAGCCCA TTGCGGGCAA TATGAATTTA
ATTAAGCCTT CAGCAGAATT TTTAAAGGCC CTACGAGATT TAACGAGTCA ATACGGTAGT
GTTCTGATAT ATGACGAAGT CATGACTGGC TTTAGAGTCG CTCTGGGCGG TGCTCAATCA
TTACAAGGAA TAGTTCCTGA TTTAACCTGT TTGGGCAAAG TCATGGGCGG TGGTATGCCG
ATGGCTGCGT TTGGTGGAAA AAAAGAGATC ATGTCTAAAC TTGCCCCATT AGGCAATGTT
TATCAGGCGG GAACTTTGTC GGGCAACCCA GTAGCAGTTG CTGCGGGACT GAAGACCTTG
GAGATTGTTT CTCGTGCTGG ATTTTATGAA TGCTTAAGCG CTCAAACAGA AAAGTTAATG
TTGGGTTTAA AGCAAGGAGC CGATAAATCA GGAATTCCAT TTGCTGTAGA TAGTGTTGGT
GGAATGTTTG GATTTTATTT TGCTGATGCT GTGCCAAGCA CCTATGAGGC AGTTACCAAA
ACCAATATTG ATGCCTTTAA GAAATTCTTT CATCTCATGT TAGATGAAGG TGTGTATTTA
GCTCCATCCG CTTATGAGGC TGGTTTCACC TCTATTGCAC ATGATGATGC GGTATTGCAA
GTGATTATTG ATGCTGCAGA AAAGTCCTTC CCGCAACTGC GTTAA
|
|---|
| Protein sequence | MTKRDQNEVL FERAQKTIPG GVNSPVRAFR QVGGTPRFIS KAKGPYFWDA ENKRYIDLIM
SWGPMIAGHA NPEVVEAVQK AAETSFSYGA PTEGEIELAE RICALVPSIE QVRMVSSGTE
ATMSALRLAR GYTNRDLIIK FEGCYHGHAD SLLVKAGSGL LTFADSTQNA PSSGGVPQDL
VKHTLVLPYN DVEAIEAVFK KQGNEIAAVI LEPIAGNMNL IKPSAEFLKA LRDLTSQYGS
VLIYDEVMTG FRVALGGAQS LQGIVPDLTC LGKVMGGGMP MAAFGGKKEI MSKLAPLGNV
YQAGTLSGNP VAVAAGLKTL EIVSRAGFYE CLSAQTEKLM LGLKQGADKS GIPFAVDSVG
GMFGFYFADA VPSTYEAVTK TNIDAFKKFF HLMLDEGVYL APSAYEAGFT SIAHDDAVLQ
VIIDAAEKSF PQLR
|
|---|
| |