Gene Pnuc_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0236 
Symbol 
ID5052836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp236537 
End bp236962 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content42% 
IMG OID640470388 
Producthypothetical protein 
Protein accessionYP_001155021 
Protein GI145588424 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATT CATATCTTTG GGTAAAGACC TTTCATATTG TGTTGATCAC ATCTTGGTTT 
GCTGGACTCT TTTATCTGCC TCGTATTTAT GTCAATTTGG CAGAGGAAAA AAATCCCGAG
GTCTACGCAC GTCTCTTGGG TATGGCAGAT CGCCTCTTTC GATTTATGAC TATTTTGGCT
ATCCCCGCGG TATTGTTGGG GTTAGTACTT TTTTTGGGTT TTGGCATTGG TAAGGGCGAG
GTGTGGATGC ATGCCAAGCT CCTGTTTGTC ATTTTGGTAA TTGGATATCA CCATGCTTGC
TGGAGCTTAT TGAAAAAGTT TCGCGCTGGT GTGAATACCA AATCCAATGT CTGGTATCGC
TGGTTTAATG AGGTTCCCGT CATCTTGTTG CTGGTGATTG TTGCTTTAGT CATTTTTAAG
CCTTAA
 
Protein sequence
MTNSYLWVKT FHIVLITSWF AGLFYLPRIY VNLAEEKNPE VYARLLGMAD RLFRFMTILA 
IPAVLLGLVL FLGFGIGKGE VWMHAKLLFV ILVIGYHHAC WSLLKKFRAG VNTKSNVWYR
WFNEVPVILL LVIVALVIFK P