Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0236 |
Symbol | |
ID | 5052836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 236537 |
End bp | 236962 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640470388 |
Product | hypothetical protein |
Protein accession | YP_001155021 |
Protein GI | 145588424 |
COG category | [S] Function unknown |
COG ID | [COG1981] Predicted membrane protein |
TIGRFAM ID | [TIGR00701] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATT CATATCTTTG GGTAAAGACC TTTCATATTG TGTTGATCAC ATCTTGGTTT GCTGGACTCT TTTATCTGCC TCGTATTTAT GTCAATTTGG CAGAGGAAAA AAATCCCGAG GTCTACGCAC GTCTCTTGGG TATGGCAGAT CGCCTCTTTC GATTTATGAC TATTTTGGCT ATCCCCGCGG TATTGTTGGG GTTAGTACTT TTTTTGGGTT TTGGCATTGG TAAGGGCGAG GTGTGGATGC ATGCCAAGCT CCTGTTTGTC ATTTTGGTAA TTGGATATCA CCATGCTTGC TGGAGCTTAT TGAAAAAGTT TCGCGCTGGT GTGAATACCA AATCCAATGT CTGGTATCGC TGGTTTAATG AGGTTCCCGT CATCTTGTTG CTGGTGATTG TTGCTTTAGT CATTTTTAAG CCTTAA
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Protein sequence | MTNSYLWVKT FHIVLITSWF AGLFYLPRIY VNLAEEKNPE VYARLLGMAD RLFRFMTILA IPAVLLGLVL FLGFGIGKGE VWMHAKLLFV ILVIGYHHAC WSLLKKFRAG VNTKSNVWYR WFNEVPVILL LVIVALVIFK P
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