| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0234 |
|---|
| Symbol | |
|---|
| ID | 5053504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 234096 |
|---|
| End bp | 235157 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640470386 |
|---|
| Product | DNA polymerase III, delta subunit |
|---|
| Protein accession | YP_001155019 |
|---|
| Protein GI | 145588422 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAAG TGGATGCCCT GCAAACACAT CTCAAATCTT TAAATGCGGG TGGGGTCATG
GGATCTCTAT ATATTTTTAG TGGCGATGAA CCTTTGCTTA TGATGGAGGC AATGGATCAG
CTGCGTTCTG TGGCCAAAAA ATTGGGCTTT ACTGAGCGAG AAGTGTTACT CCAGGAGCGT
GGGTTTGATT GGAGCGCTTT GTTAAATGCC GGCCAAACGA TGTCTTTATT TGGAGATAAA
CGTTGGGTTG AACTCAGAAT TCCAACGGGC AAGCCTGGTC GTGACGGGGC GGATGCTCTA
AAACAATTTG CAGCACAAAT GGAATCCCAG GCCAATTCAT CAGATGGGCC GGACACGGTG
GTATGCATTG TGTTGCCTCG TTTAGATGGA AAAACAAAAA CTTCCGCATG GTTTAGTGCT
CTTGATGATG CGGGGATGGC AATACAGATT GATTCATTGG ATCGCGGCCA TTTACCTCAC
TGGATTTCGG GCAGATTAAA AAAGCAAGAG CAAGAAGTAG AGGGCGGACC AGAGGGTCAG
CGTGCTTTGG AATTCATTGC AGATCAGGTT GAAGGCAATC TGATTGCTGC CCATCAAGAA
ATTTTGAAAT TAGGCCTGCT ATATCCTAGT GGTACCTTAA CCGAAGAGCA AGTACGCTCT
TCCATCTTGA AAGTCGCGCG TTATAACGTC TTTGAGCTAA CTGAAGCAAT GCTTGCTGGC
GATTTACCAA GATTAAATCG CATGTTGGAT GGATTAAAAG GTGAGGGTGA GCCGCTGGTG
CTGATTCTGT GGAGCGTAAC TGAAGAGCTT AGGCTACTAT CTAAACTAAA GATGGCTAGT
GATGCTGGCG AGTCCATGCA ACAGTTGATG CGCGCGAATC GCATTTGGGG AAATAAAGAG
CGTTTATACC CAAGCGCCTT AAAGCGTATT CAACCTTTAA AACTAAGAAG GGCTATGCAG
GTTGCCGCAG GCTTAGATCG TCAGGTGAAA GGCCTTTCTG CTGCTGAATT GCCCGCAGAC
CCTTGGGATG GTTTACGCCT GGTGGGGAAT TTGTTGCGCT AA
|
|---|
| Protein sequence | MVKVDALQTH LKSLNAGGVM GSLYIFSGDE PLLMMEAMDQ LRSVAKKLGF TEREVLLQER
GFDWSALLNA GQTMSLFGDK RWVELRIPTG KPGRDGADAL KQFAAQMESQ ANSSDGPDTV
VCIVLPRLDG KTKTSAWFSA LDDAGMAIQI DSLDRGHLPH WISGRLKKQE QEVEGGPEGQ
RALEFIADQV EGNLIAAHQE ILKLGLLYPS GTLTEEQVRS SILKVARYNV FELTEAMLAG
DLPRLNRMLD GLKGEGEPLV LILWSVTEEL RLLSKLKMAS DAGESMQQLM RANRIWGNKE
RLYPSALKRI QPLKLRRAMQ VAAGLDRQVK GLSAAELPAD PWDGLRLVGN LLR
|
|---|
| |