| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0224 |
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| Symbol | |
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| ID | 5053370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 221648 |
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| End bp | 223969 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470376 |
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| Product | malic enzyme |
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| Protein accession | YP_001155009 |
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| Protein GI | 145588412 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG AAAACAATAA AGAACAACAA ATCGCCGCCT TAAGAGAGGC CGCCCTCCAG
TACCACGAGT TTCCAGTCCC TGGAAAAATC GAAATTGCCC CCACAAAACA ACTCACAAAT
CAACGCGATT TAGCGCTTGC ATATACGCCA GGTGTTGCTG CACCTTGTGA AGAGATTGTT
AAAGATCCAG CGAATGCATT TAAATACACA GCCCGAGGAA ATCTCGTTGG TGTTATTACA
AACGGAACGG CAGTTCTGGG TTTGGGAAAT ATTGGACCAT TGGCTAGTAA GCCAGTGATG
GAAGGCAAAG CGGTACTGTT TAAGAAATTT GCTGGCATTG ATGTTTTCGA TATCGAAGTA
AACGAAAACG ATCCTGACAA GTTAGTAGAA ATTATTGCTG CGCTTGAGCC AACCTTTGGT
GGTATTAATT TAGAAGACAT CAAAGCGCCA GATTGCTTTG TTGTAGAGCG CAAATTGCAA
GCGCGCATGA AGATTCCAGT CTTTCATGAT GATCAGCATG GAACGGCAAT TGTGGTGGCG
GCTGCCATTC TTAATGGCTT AAAGGTGGTT GGTAAGGACG TGGGTAATGT GAAGCTGGTG
ACCTCTGGAG CTGGCGCAGC TGCCTTAGCC TGCTTAGACT TATTGGTTGA TCTGGGTATT
CCGCGTAAAA ATATTTGGGT AACCGATCTT GCTGGTGTGG CTTACAAGGG TCGCAAGGAG
TTAATGGATC CTGAGAAAGA GCCATTCTGC CAAGAAACTG ATTTGAGAAC ATTAGATCAG
GCAATTGAAG GTGCGGATAT TTTCTTGGGT CTATCAGCTG GCGGTGTACT CAAGCCAGAG
ATGGTAAAGA AGATGGCAGA CAAGCCATTG GTCTACGCCT TAGCCAATCC AACCCCAGAA
ATTCTGCCGG AAGAAGTCAA GGCAGTTCGC CCGGATGCAG TAATGGCAAC TGGCCGCACT
GACTATCCTA ATCAAGTCAA TAACGTGTTG TGTTTTCCAT TTATCTTCCG TGGTGCATTA
GACGTCGGTG CAACAACGAT TACCCGTGGC ATGGAAGTGG CTGCTGTGAA GGCTGTAGCA
GAGTTGGCAC AAGCAGAGCA AAGCGAAGTG GTGACTTCAG TTTATGGAAT TGAAAACCTT
TCTTTTGGTC CAGAGTATTT AATCCCAAAA CCATTTGACC CACGTTTAAT AACCGTGATT
GCCCCTGCAG TGGCAAAAGC TGCCATGGAT GATGGCGTTG CCTTACGTCC GATTAAAGAC
TTCGACGCTT ATCGCAATCA GTTACAGCAA TTTGTGTACC ACTCTGGTAC TTTGATGAAG
CCCCTCTTCA GTATTGCGAA GAGAGTTCCA GCAAATCAAA AACGCATTGT GTTTGCTGAA
GGTGAAGATG AGCGCGTATT GCGTGCCGTA CAAATTATTC TCGATGAGCA TTTGGCAACC
CCTATTTTGA TCGGGCGGCC TGCAGTTATT GAGCACCGCA TTGAAAAATT TGGCCTGCGC
ATGAAGGCTG GAGATGACTT TGAGATCGTT AACCCAGAGA ATGATTTACG TTTCCGCGAT
TTCTGGCAAA CCTATTTGGG CCTTACTGAG CGCAAAGGTG TAACTCAATC TTTTGCGAAA
CTAGAAGTGC GTCGCCGTAA TAGCTTGATC GGTAGTCTAT TGATTGAAAA GGGGATGGCT
GATGGCATGA TTTCTGGCAC TGTTGGCAAC ATTGCTACTC ACCTCAAATA TATTGATGAA
GTAATTGGTC ATGAGGAAGG GGCGAATGTC TATGGCGCAA TGTCTGGTTT GATTCTTCCA
GGCCGTCAAG TATTCTTGGT GGATACCCAC ATCAATATTG ATCCAACTGC TCAGCAGTTA
TCGGATTTAA CTTTAATGGC TGCTAGTGAG ATGCGTAAGT TAGGTCTCAT ACCTAAAGTT
GCACTTTTAT CGCACTCCAA TTTTGGCTCA AGCAATGCGC CTTCTGCAAT CAAGATGCGT
GAAGTATTAG CGTTGCTGCA AAAAGCCGAC CCAACTCTTG AAGTAGATGG AGAGATGCAT
GGGGATAGCG CTTTAGATGC AAGCATTCGT GAGGGGGCTG TATCTTCATC AACGTTAAAA
GGTGATGCGA ATTTATTAGT TCTCCCGAAT ATTGATGCAG CTAATATTTC TTACAATTTG
TTAAAAACTG CAGCGGGTAA TGGCATTGCT ATCGGACCGT TATTGTTGGG TGTTGCCAAG
CCAATTCATA TTCTGACTCC AGCCGCGACC GTACGACGAA TCGTGAATGT GACCACTTTG
GCGGTCGTTG AGGCGGCAAG TAACGCTAGG GGCATTTCTT AA
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| Protein sequence | MSKENNKEQQ IAALREAALQ YHEFPVPGKI EIAPTKQLTN QRDLALAYTP GVAAPCEEIV
KDPANAFKYT ARGNLVGVIT NGTAVLGLGN IGPLASKPVM EGKAVLFKKF AGIDVFDIEV
NENDPDKLVE IIAALEPTFG GINLEDIKAP DCFVVERKLQ ARMKIPVFHD DQHGTAIVVA
AAILNGLKVV GKDVGNVKLV TSGAGAAALA CLDLLVDLGI PRKNIWVTDL AGVAYKGRKE
LMDPEKEPFC QETDLRTLDQ AIEGADIFLG LSAGGVLKPE MVKKMADKPL VYALANPTPE
ILPEEVKAVR PDAVMATGRT DYPNQVNNVL CFPFIFRGAL DVGATTITRG MEVAAVKAVA
ELAQAEQSEV VTSVYGIENL SFGPEYLIPK PFDPRLITVI APAVAKAAMD DGVALRPIKD
FDAYRNQLQQ FVYHSGTLMK PLFSIAKRVP ANQKRIVFAE GEDERVLRAV QIILDEHLAT
PILIGRPAVI EHRIEKFGLR MKAGDDFEIV NPENDLRFRD FWQTYLGLTE RKGVTQSFAK
LEVRRRNSLI GSLLIEKGMA DGMISGTVGN IATHLKYIDE VIGHEEGANV YGAMSGLILP
GRQVFLVDTH INIDPTAQQL SDLTLMAASE MRKLGLIPKV ALLSHSNFGS SNAPSAIKMR
EVLALLQKAD PTLEVDGEMH GDSALDASIR EGAVSSSTLK GDANLLVLPN IDAANISYNL
LKTAAGNGIA IGPLLLGVAK PIHILTPAAT VRRIVNVTTL AVVEAASNAR GIS
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