| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0216 |
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| Symbol | |
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| ID | 5053943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 215007 |
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| End bp | 215894 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640470368 |
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| Product | TonB family protein |
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| Protein accession | YP_001155001 |
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| Protein GI | 145588404 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCAC AGATTAAATT CTTTGAATTT ACTTGCCCCG ATAAGCTCAA GGGTGTTTAT
CAGTATTTAC AAAATACTTG GCAGCGCCAC CCTCTGCGAT TGGCTCTTTG TTTATCACTG
CTGATTCATA TTCTTTTTTT GTCATTTCGC TGGGGCGTTG GTGAAGTTCA AAATCGGCGC
CTCAATACCC CCTTAAGTGT TGTGTTGGTC AATGCCAGCA ACAAGCTACC CCCTAAGCAA
GCCAACAAAT TGGCGCAGGC GGACTTGCAG GGAGGTGGTA AAACGGAAAC GCAAGATGCC
ACTGCACTGC ATCGCGCAAG AATGGGGGCT GAAGCGCGTT TGGAGATTTT AGAAAAACAA
CAGCGCCAAA TGTTGGCTAA GCTAGATGAG CAGCGTACCC AATCACGTGG ACGCAAGAGT
GGGGATGCAC AAAAAATGGT TTCCCAACTT AACTCCTTAG AGGCAGAGCT GGCTAAACGC
TTACAGGTTG AGGGGCGTGA ACCTCGACGT AAAGTAATGA CTGGTGCCAA TACCAAGGCT
GTCACCTTTG CGCATTACTA CGATGCGATG CGACAAAAAA TTGAAGCGTA TGGCAGTGCA
TTTTTCCCCA GAGCAAATGG GCGACCTCTT TATGGCAGCT TAGTCATCGT TGTGAGTGTT
GATTCTCAGG GAGGAATCAC TACCAATCCT CAGGGTAAGG AAGGATTATC GATTGGACGT
AGCTCAGGCA ACCCTGAGTT GGACCGCCAA GCTTTAGCGA TTGTTCGGTC TTCGGCTCCG
TTTGGGCCAT TTCCTGCTGA AATGCGCCAA CAAATCGATG TACTGGATTG GATCTCTACC
TTTGAATTCA CCCGAGATGG CAATGACCAT CTTGAATTGC GTCATTAA
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| Protein sequence | MLAQIKFFEF TCPDKLKGVY QYLQNTWQRH PLRLALCLSL LIHILFLSFR WGVGEVQNRR
LNTPLSVVLV NASNKLPPKQ ANKLAQADLQ GGGKTETQDA TALHRARMGA EARLEILEKQ
QRQMLAKLDE QRTQSRGRKS GDAQKMVSQL NSLEAELAKR LQVEGREPRR KVMTGANTKA
VTFAHYYDAM RQKIEAYGSA FFPRANGRPL YGSLVIVVSV DSQGGITTNP QGKEGLSIGR
SSGNPELDRQ ALAIVRSSAP FGPFPAEMRQ QIDVLDWIST FEFTRDGNDH LELRH
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