| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0213 |
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| Symbol | |
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| ID | 5052321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 210836 |
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| End bp | 212233 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470365 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_001154998 |
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| Protein GI | 145588401 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATAC ATATTTTGGG CATTTGCGGT ACTTTCATGG GCGGCATTGC CGCAATCGCT
CGTCAGGCTG GACATCGCGT TACTGGTTGT GATGCTAACG TGTATCCACC AATGAGCACT
CAGCTTGAAG CGCAAGGCAT TGAGCTGATT GAGGGATTCT CGCCTGACCA ATTATTACAG
TTTGAGACCA TGCCCGATTT ATTTGTTATT GGCAATGTGG TTTCTCGCGG TAATTCCTTG
ATGGAAGCAA TTCTGAACCA AGGTCTTCCT TATATTTCAG GCCCGCAATG GTTGGGCGAA
CAAGTTCTCT ATGGCCGACA TGTTTTGGCT GTTGCAGGTA CACACGGCAA GACAACTACT
TCAGCCATGC TCACCTGGAT TTTGGAATTT AACGGATATA AGCCCGGTTA TTTAATTGGT
GGAGTACCGC TCAATTTCAC AGTGTCTGCT CGCTTAGGCG ACAGTCAATA TTTTGTGATC
GAAGCCGATG AATATGACAC TGCATTTTTT GATAAGCGCA GCAAGTTTGT CCACTACCGT
CCTCGCACAG CTCTATTAAA TAATTTAGAG TTTGATCACG CAGATATTTT TGCAGATCTC
GCTGCAATCG AAACCCAGTT TCATCATTTG GTTCGCACGG TACCTGGTGA TGGCTTGCTT
GTGGTCAATG GTGAAGAAGT TGCGCTAGAG AGAGTAATTA CCCGTGGCGC TTGGGCACCA
GTAGAGCGCT TTGGACAGGA CCTAGAAAAT GCATGGTCCT TGGTATCGCA AGCGTCCGAC
GGTTTTATTG TGCGTCAGCA TGGCAAAGAA GTAGCTACTG TTGCTTGGGC GCCAGATTCT
GGGGTGATGG GAAGACATAA CCAATTAAAT GCACTGGCTG CGATTGCTGC AGCAAATCAC
ATTGGAATAT CCCCAAAAGA TTCCGCGCGT GCTTTGGCTG AATTTAAAAA TGTGAAGCGA
CGTTTAGAAA CTATTGGCGT TGCCAATGGC GTTACTGTGT ATGACGATTT TGCGCATCAC
CCAACAGCAA TTACAACTAC TGTGGACGGT CTTCGTCGAC GAGTTGGAAA GGCGCGCATC
TTGGCTGTTC TGGAGCCCCG TTCAAATACG ATGAAGCTCG GCGTTATGAA GGCGCAATTA
CCAGGAAGCT TGATGGCTGC AGATAAAGTT TTTGCCTACG GTGCTAGCAC CGGTAAGGAA
TCTTTGGGAT GGGATCTTCC TGATGTGCTT TCCCCCTTAA ACCAAACAGA AGCAGGTAAA
GCCCTAGCTT TTAATGATCT CGATGCTTTG GTAAATGTGG TTGCTCAAGA AGCTAGGCCT
GGGGATCACA TCTTAGTCAT GAGTAATGGT GGTTTTGGTG GCGTACATCA AAAGATACTT
AATGCCATAT TGGCTTAA
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| Protein sequence | MHIHILGICG TFMGGIAAIA RQAGHRVTGC DANVYPPMST QLEAQGIELI EGFSPDQLLQ
FETMPDLFVI GNVVSRGNSL MEAILNQGLP YISGPQWLGE QVLYGRHVLA VAGTHGKTTT
SAMLTWILEF NGYKPGYLIG GVPLNFTVSA RLGDSQYFVI EADEYDTAFF DKRSKFVHYR
PRTALLNNLE FDHADIFADL AAIETQFHHL VRTVPGDGLL VVNGEEVALE RVITRGAWAP
VERFGQDLEN AWSLVSQASD GFIVRQHGKE VATVAWAPDS GVMGRHNQLN ALAAIAAANH
IGISPKDSAR ALAEFKNVKR RLETIGVANG VTVYDDFAHH PTAITTTVDG LRRRVGKARI
LAVLEPRSNT MKLGVMKAQL PGSLMAADKV FAYGASTGKE SLGWDLPDVL SPLNQTEAGK
ALAFNDLDAL VNVVAQEARP GDHILVMSNG GFGGVHQKIL NAILA
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