Gene Pnuc_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0211 
Symbol 
ID5053909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp209584 
End bp210033 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content46% 
IMG OID640470363 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001154996 
Protein GI145588399 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.324309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAA AAGCTTCAAT TCTCGTAATT CAGGGACCCA ACCTCAATCT ATTAGGGACC 
CGTGAGCCAG ACGTCTACGG CAAAACTACC CTAGAAGATA TCCATCAAAA GCTTGGCGAA 
CTAGCCAAAG CTCAGTCAGT CGACCTCAGC ACATTCCAAA GCAATCATGA GGGCGAGTTA 
ATCGACCGCA TTCAGAAAGC CAAACAAGAC GGAGTTGATT TCATCATCAT CAATCCAGGC 
GCCTTTACCC ATACCAGTGT CGCTCTGCGT GATGTTTTGG CTGGAGTCGC AATCCCCTTT 
ACTGAAGTCC ATTTATCCAA TATTCATCAA CGCGAAGAGT TCCGTAAACA CTCCTATTTG 
TCCGATATCG CTAATGGGGT GATTTGCGGC CTTGGCGCCA TTGGATATGA GTTAGCCCTT 
CAAGCAGCAA TTGCCCGTTT ACAAAGATAA
 
Protein sequence
MSKKASILVI QGPNLNLLGT REPDVYGKTT LEDIHQKLGE LAKAQSVDLS TFQSNHEGEL 
IDRIQKAKQD GVDFIIINPG AFTHTSVALR DVLAGVAIPF TEVHLSNIHQ REEFRKHSYL 
SDIANGVICG LGAIGYELAL QAAIARLQR