Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0205 |
Symbol | |
ID | 5052806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 203116 |
End bp | 204300 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640470357 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_001154990 |
Protein GI | 145588393 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000182543 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGAATT GGGAAGAAGA AGTTGCTCCA GCACTAGCGA AAGCTGGTCT TGCACCGCAG CCGGTTGCAG TGGAGCCACA ACGCCCACAG CCAGATCAAG TAGCAATAGC ACCGCAAACA ACGGCGCCTG CGCCTGTTGA AGCCGCTAAT TTATCTGGTG GCGCAGCTTT GCGTGTCAAT GCTGCTGATA AGCGCGTGAT TAACGCCAAG ACTGACGTAA ATCAGCTCGT GCCATTTAAA TATAAGTGGG CTTGGGAGAA GTATTTGGCA GGTTGTGCAA ACCATTGGAT GCCACAAGAG ATCAACATGA ATCGCGATAT CGCGCTTTGG AAAGATCCAA ATGGTCTTAC AGAAGATGAG CGGCGCATTA TTAAGCGCAA TCTTGGTTTT TTTACTACCG CTGATTCTTT GGCTGCAAAC AATATTGTTT TGGGGACTTA TCGCCACATT ACCGCCCCAG AATGCCGTCA ATACCTGTTG CGCCAGGCGT TTGAAGAGGC AATTCATACT CACGCGTATC AATATATTGT CGAATCTTTG GGCTTAGATC AGAGCGAAAT CTTCAACGCG TACAACGAAA TTGAATCCAT TCGCGCTAAA GATGAGTTCT TGATTCCTTA CATCGATGTA CTTACCAATC CAAATTTCAA GACTGGCACA TTAGAAACTG ACCAAACTTT GCTCCGCTCA CTCATTGTTT TTGCTTGCGT GATGGAAGGT TTATTCTTTT ATGTTGGTTT TACGCAAATA CTTGCAATGG GTCGCCAAAA TAAAATGACG GGTGCTGCTG AGCAGTATCA ATACATCCTT CGTGACGAGT CAATGCACTG CAATTTTGGT ATCGATTTAA TTAATCAAAT AAAGCTGGAG AACCCGCAGT TATGGACTTC CGCGTTCAAA GATGAGATCA AATCTATCTT CGAAAAAGCA GTCGAATTAG AGTACCGTTA TGCCGAAGAT ACGATGCCTC GCGGAGTGCT CGGATTGAAC GCTCCGATGT TCAAAGGGTA CCTAAGATAC ATTTGTAATC GCAGATGTTT GCAAATAGGA CTTGACGCGA TGTTCCCAAA TGAAGAGAAT CCATTTCCAT GGATGTCAGA AATGATTGAT CTGAAAAAAG AAAGAAACTT TTTTGAGACA CGCGTTATTG AGTATCAAAC CGGTGGTGCG CTAAGTTGGG AGTAG
|
Protein sequence | MLNWEEEVAP ALAKAGLAPQ PVAVEPQRPQ PDQVAIAPQT TAPAPVEAAN LSGGAALRVN AADKRVINAK TDVNQLVPFK YKWAWEKYLA GCANHWMPQE INMNRDIALW KDPNGLTEDE RRIIKRNLGF FTTADSLAAN NIVLGTYRHI TAPECRQYLL RQAFEEAIHT HAYQYIVESL GLDQSEIFNA YNEIESIRAK DEFLIPYIDV LTNPNFKTGT LETDQTLLRS LIVFACVMEG LFFYVGFTQI LAMGRQNKMT GAAEQYQYIL RDESMHCNFG IDLINQIKLE NPQLWTSAFK DEIKSIFEKA VELEYRYAED TMPRGVLGLN APMFKGYLRY ICNRRCLQIG LDAMFPNEEN PFPWMSEMID LKKERNFFET RVIEYQTGGA LSWE
|
| |