| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0204 |
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| Symbol | |
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| ID | 5052703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 200089 |
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| End bp | 203070 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470356 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001154989 |
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| Protein GI | 145588392 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000988288 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATACG CAAATCCCCA GACAGCAGGC CAGCCAAGTG GAGCCAATAA TCCAGGAATG
GGTGGCGCAG GGGCAATGAA TCAGACGCCA TCTGCCGGTT TTGTCGCTGG TGGTGTTGGG
GGTAATCAAG CTACTCAATT GTCAGATTAC AAGATCATTC GTCGCAACGG TTCAGTCGTG
GCTTTTGAGC CATCCAAGAT TGCCATTGCG GTAACTAAAG CATTTTTAGC GGTTAACGGT
GGCCAAGGTG CTGCTTCTGC GCGCGTACGC GAGCAAGTGG AGCAACTGAC TCATTCAGTG
GTGCGCGCTT TATTACGCAG TCGTCCAAAT GGCGGCACTT TCCACATTGA AGATATTCAA
GACCAAGTTG AATTAGCATT AATGCGTAGT GGTGAGCACA ACGTTGCTCG CGCATATGTT
CTTTATCGCG AAAAGCGCAA TCAAGAGCGT GCGGCTCAAC AAGAAGTGGC TCAAGAATCA
CAATCAGCCG GTCAAGCTAC TGAATCCGGT ATCAAGGTTA CTGACAATGG CGTTGAAAAG
TGGCTTGATA TGGCGGCACT CCGCACTGTG ATCGAAGCAG CTTGCGAAGG CTTGGGCAAT
CATATTGATG CCACCCCGAT CATTACTGAA ACCATCAAGA ATTTGTACGA TGGTGTACCG
ATGGCTCAAG TCTATGACTC AGCTATCTTG GCTTCACGTA CTTTGATTGA GAAAGATCCT
GCATTCAGCC AGGTAACAGC TCGTATCTTG ATGCATGTGA TTCGTAAAGA AATCCTAGGC
AAGGAAGTAT TGCAAGGCGA TATGCAGTCT GAGTACGGCA CTTACTTTGC CAAGTACATT
AACGAAGGTA TCTCTGCTGA ATTGTTAGAT CCACGTATGC GTGAGTTTGA CTTGCCACGT
TTGGCTGCTG CTTTGAATGC CAGCCGCGAC TTGCAGTTCA ATTACCTTGG CTTGCAGACT
TTGTATGACC GCTATTTCTT GCATATTGAA GACCGTCGTA TCGAAATGCC ACAGGCTTTC
TTTATGCGCG TGGCAATGGG CTTGTCCTTA AATGAATTGG ACCGTGAGCG TCGTGCAATC
GAGTTCTATG AAATCCTCTC CACATTTGAT TTCATGTCCA GCACACCAAC CTTGTTCAAT
TCAGCAACTA CTCGTCCACA ACTCTCTAGC TGCTATTTGA CGACTGTAGA AGATGACCTC
GATGGAATTT ATGAGGCATT GAAAGAGAAT GCTTTGCTAT CCAAGTTTGC AGGCGGCTTG
GGCAATGACT GGACTAACGT ACGTGCCTTG GGCAGCCATA TTAAGGGCAC CAACGGTAAG
TCACAAGGCG TAGTGCCATT CCTCAAAGTA GTAAATGACA CTGCTGTTGC TGTAAACCAA
GGCGGTAAAC GTAAAGGTGC TGTTTGCGCC TACTTGGAAA CATGGCACTT AGATATTGAA
GAATTCTTGG AATTGCGTAA AAACACCGGT GATGATCGTC GTCGTACGCA TGACATGAAT
ACTTCTAACT GGATTCCTGA CTTGTTTATG AAGCGCGTCA TGGAAAACGG TGACTGGACA
TTGTTCTCTC CATCTAATAC CCCTGATTTG CATGACAAGT ACGGTAAAGC GTTCGAAGAG
GCTTATGTTG CTTATGAGCA AAAGGCGGAT CGTGGTGAAT TGAAGCCCTT CCGCAGAATT
CCTGCGCAGC AGTTATGGCG CAAGATGTTG GGCATGTTGT TTGAAACTGG CCACCCATGG
ATCACTTTCA AAGACCCTTG CAATATTCGC AGCCCACAGC AGCATATTGG CGTAGTGCAC
TCATCTAATT TGTGTACTGA GATTACTTTG AACACCAATG AGACTGAAAT CGCGGTTTGC
AACCTGGGTT CTGTGAATTT GACTGCCCAC ATGACGACTG ATGCCAACGG TAAATTGGTG
TTGGATCATG AGAAGCTCCA AAGAACTGTG CGTACAGCAA TGCGTATGTT GGATAACGTA
ATTGATATCA ATTACTACGC GGTTGCCAAG GCTCGCAATT CGAACTTGAA GCATCGTCCA
GTCGGCATGG GCATCATGGG CTTCCAGGAC TGCTTGCACA TGCAGCGTAT TCCTTATGCT
AGCGAAGAGG CAGTGAAATT TGCCGACTCT TCTATGGAAG CGGTTTGCTA CTACGCTTAT
CAAGCGTCTA ATGAATTAGC TGAAGAGCGC GGCGTTTACA GTACATACAC AGGCTCCCTA
TGGGATCGCG GCATCCTGCC ACAAGACTCT GTAGCATTGT TAGCGCAAGA GCGTGGCGGA
TATCTGGAAG TAGATAACTC CTCCACTATG GATTGGAGTG GTTTGCGCGC GCGTATCAAG
CAATACGGTA TGCGTAACTC CAATTGCGTA GCAATTGCAC CAACAGCAAC GATTTCTAAC
ATTATTGGCG TATCTGCTTG TATCGAACCA ACCTTCCAAA ACTTGTTTGT GAAGTCCAAT
CTTTCTGGTG AGTTCACAGT GGTAAACGAG TATTTGGTAC GTGATTTGAA AGATCGCGGC
CTTTGGGATG AAGTGATGAT TGCTGACTTA AAGTACTTTG ACGGTACTTT GTCTAAAATT
GATCGTATTC CACAAGATTT GCGTGATTTG TATGCGACTG CCTTCGAGGT TGAGCCAAGC
TGGTTGGTTG AGGCAGCTTC CCGCCGTCAA AAGTGGATTG ACCAAGCGCA GTCACTCAAT
ATCTACATGG GTGGTGCTTC TGGTAAGAAA TTGGATGACA CCTATAAATT GGCGTGGTTG
CGCGGCTTGA AGACTACTTA CTACCTCCGC ACGATGGCAG CGACTCACGT TGAGAAATCG
ACTGTTGCTA GCGGCCAGTT GAACTCGGTT TCGAGTGGTG GCGGTGTAAA TGGTACTGAT
GCAACTGCCG CAAGTGCTGC GGGTGGAGTT GAGGCTGATG GCCCGGTTTG CACAATGCGT
CCAGGTGATG CTGGATTTGA AGAATGTGAA GCATGCCAAT AA
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| Protein sequence | MTYANPQTAG QPSGANNPGM GGAGAMNQTP SAGFVAGGVG GNQATQLSDY KIIRRNGSVV
AFEPSKIAIA VTKAFLAVNG GQGAASARVR EQVEQLTHSV VRALLRSRPN GGTFHIEDIQ
DQVELALMRS GEHNVARAYV LYREKRNQER AAQQEVAQES QSAGQATESG IKVTDNGVEK
WLDMAALRTV IEAACEGLGN HIDATPIITE TIKNLYDGVP MAQVYDSAIL ASRTLIEKDP
AFSQVTARIL MHVIRKEILG KEVLQGDMQS EYGTYFAKYI NEGISAELLD PRMREFDLPR
LAAALNASRD LQFNYLGLQT LYDRYFLHIE DRRIEMPQAF FMRVAMGLSL NELDRERRAI
EFYEILSTFD FMSSTPTLFN SATTRPQLSS CYLTTVEDDL DGIYEALKEN ALLSKFAGGL
GNDWTNVRAL GSHIKGTNGK SQGVVPFLKV VNDTAVAVNQ GGKRKGAVCA YLETWHLDIE
EFLELRKNTG DDRRRTHDMN TSNWIPDLFM KRVMENGDWT LFSPSNTPDL HDKYGKAFEE
AYVAYEQKAD RGELKPFRRI PAQQLWRKML GMLFETGHPW ITFKDPCNIR SPQQHIGVVH
SSNLCTEITL NTNETEIAVC NLGSVNLTAH MTTDANGKLV LDHEKLQRTV RTAMRMLDNV
IDINYYAVAK ARNSNLKHRP VGMGIMGFQD CLHMQRIPYA SEEAVKFADS SMEAVCYYAY
QASNELAEER GVYSTYTGSL WDRGILPQDS VALLAQERGG YLEVDNSSTM DWSGLRARIK
QYGMRNSNCV AIAPTATISN IIGVSACIEP TFQNLFVKSN LSGEFTVVNE YLVRDLKDRG
LWDEVMIADL KYFDGTLSKI DRIPQDLRDL YATAFEVEPS WLVEAASRRQ KWIDQAQSLN
IYMGGASGKK LDDTYKLAWL RGLKTTYYLR TMAATHVEKS TVASGQLNSV SSGGGVNGTD
ATAASAAGGV EADGPVCTMR PGDAGFEECE ACQ
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