| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0201 |
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| Symbol | |
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| ID | 5053697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 196755 |
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| End bp | 198137 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470353 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001154986 |
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| Protein GI | 145588389 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.999189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGAAA ACCTCACCGA TCGTCTATCT CGCGTTGTTA AAACAATGCG GGGTCAAGCT
CGCCTCACCG AAGACAACAC TGCAGAGATG CTGCGGGAGA TCCGACTCGC CCTCTTAGAG
GCTGACGTAG CCCTGCCAGT AGTTAAATCC CTGTTAGAGC AAATTAAATT TAAAGCTCTT
GGTGAAGAGG TGGTTGGAAG CTTAAGCCCA GGGCAGGCGC TAGTAGGGGT TGTACAGCGC
GAACTCGCCC AAGTCATGAT GGGCGACACC AATCAAAGTG GTGAACTCAA TTTAGCTACC
CAGCCACCAG CAGTCATTTT GATGGCTGGT TTGCAGGGCG CAGGTAAAAC TACCTCAGTT
GGAAAGCTAG CCAAATGGCT GCAAGAGAAA AAGAAAAAGA AAGTTCTCAC TGTTTCTTGT
GACGTATATC GTCCAGCAGC GATTGAGCAG TTAGAAACGG TCACTAAACA GGTTGGCGCT
GAATTTTTCC CAAGTAACGT CAATCAAAAA CCAAACGATA TAGCGACTGC CGCTCTTGAT
TGGGCGCGAC GCCATTATTT TGATGTGGTG ATTGTCGATA CCGCAGGTCG CCTAGGTATT
GATGAAGCAC TCATGCAAGA GATTAAAACC TTGCATGCCA GCTTAAACCC CATTGAGACA
TTATTTGTTG TTGATGCCAT GCTTGGTCAA GATGCGGTCA ACACTGCCAA AGCCTTCCAT
GAAGCATTAC CACTTACTGG CGTGATCTTG ACCAAGTTGG ATGGCGATTC ACGCGGTGGC
GCGGCGCTTT CTGTTCGACA AGTGACTGGT GTGCCCCTCA AATTTATCGG TGTTGCCGAA
AAGATGGATG GCCTAGAGGC GTTTGATGCT GAGCGTATGG CCAATCGCAT TTTGGGCATG
GGTGACATCC TCGCTTTAGT CGAACAAGCC CAACAACACG TTGATGTAGC CAAGGCAGAG
AAGTTGGCAA ACAAAATCTC TAAAGGGGGT TTTGATCTAG AGGATTTTCG CGATCAGTTG
ATGCAAATGC AAAAAATGGG TGGCATGGCC AGCCTGATGG ATAAGCTGCC GAGCCAAATG
GCACAAGCAG CATCTAAAAC AAACATGAAT GCTGCGGATA AACAAACCAA GCGGATGCGC
GGCATCATCG ATAGCATGAC GCCCCGCGAG CGAACAAAAC CAGAACTTCT TAAAGCCAGT
CGCAAACGGC GGATTGCCGC TGGCGCAGGT GTTGAAGTGC AAGAAGTCAA TCGCCTATTA
GCTCAATTTG AGCAAATGCA GACCATGATG AAGCAATTTA AAGGCGGAAA AATGGCTCGC
ACGATGGCGG CCATGGCGGC CAAAGGAGCC GCCAAAGGGA TTGGCGGACT TTTTAAGAAG
TAA
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| Protein sequence | MLENLTDRLS RVVKTMRGQA RLTEDNTAEM LREIRLALLE ADVALPVVKS LLEQIKFKAL
GEEVVGSLSP GQALVGVVQR ELAQVMMGDT NQSGELNLAT QPPAVILMAG LQGAGKTTSV
GKLAKWLQEK KKKKVLTVSC DVYRPAAIEQ LETVTKQVGA EFFPSNVNQK PNDIATAALD
WARRHYFDVV IVDTAGRLGI DEALMQEIKT LHASLNPIET LFVVDAMLGQ DAVNTAKAFH
EALPLTGVIL TKLDGDSRGG AALSVRQVTG VPLKFIGVAE KMDGLEAFDA ERMANRILGM
GDILALVEQA QQHVDVAKAE KLANKISKGG FDLEDFRDQL MQMQKMGGMA SLMDKLPSQM
AQAASKTNMN AADKQTKRMR GIIDSMTPRE RTKPELLKAS RKRRIAAGAG VEVQEVNRLL
AQFEQMQTMM KQFKGGKMAR TMAAMAAKGA AKGIGGLFKK
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