| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0200 |
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| Symbol | |
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| ID | 5052662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 194977 |
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| End bp | 196719 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640470352 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001154985 |
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| Protein GI | 145588388 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.74262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTT CACAATCATT TCTCGCCACG CTAAAAGAAG CCCCCTCTGA CGCTGAGGTG
GTTTCGCATA AGCTCATGGT TCGGGCAGGC CTGATTCGCA AAATCAGCGC AGGTATCTAT
AACTATCTGC CGCTCGGATT AAAGGTTATT CGTAAAGTAG AAAATATTAT TCGCGAGGAG
ATGAATCGCG CTGGCGCAAT CGAGCTATTG ATGCCGATGA TTCAACCTGC TGAATTGTGG
CAAGAGACTG GTCGCTGGGA AAAGATGGGG CCAGAATTAC TGCGCATTAA AGATCGCCAT
GACCGTGATT TTTTAATTCA ACCGACCTCT GAAGAGGTAA TCACCGATTT GGCTCGTAAT
GAGATCAGAA GCTACAAGCA GCTCCCAGTG AATTTTTACC AAATTCAAAC GAAGTTCCGG
GATGAACGCC GCCCACGTTT TGGGATCATG CGTGGTCGTG AGTTCAGTAT GAAAGATGCT
TACTCTTTTG ACCGTGATAC CGAGGGCTTG AAAAAATCCT ATCAAACCAT GTTTGAGGCA
TACACCCAGA TCTTTAAGCG TATGGGGCTT GAGTTCCGTG CGGTCACCGC AGATAACGGT
GCCATTGGTG GCTCTGGCAG TCAAGAGTTT CACGTCATTG CAGATACTGG TGAAGATGCC
ATTGTGTATT GCCCAAGTTC TGATTACGCA GCCAATCTTG AGGCTGCAGA GTCACTGGCC
TTGAACGCTA CACGTGGTGC CGCCACTCAG ACAATGGCGA AGGTTCCAAC CCCTGATAAG
ACAAATTGTG CAGATGTAGC TAAGCTACTT AATCTGCCGT TAGAGCAAAC CGTTAAATCG
CTATTGTTTG CTGCAGATCA AGAGTCTGGA CCAGCTAAGT TGTTCATGCT TCTTGTGCGT
GGTGATCATG AATTAAATGA AGTAAAGGCT AGCAAAGTTC CTGGCATGAC GGAATCTCGT
TTTGCCACTG AGACTGAAAT CAAGCAGGCT TGTAATGCAC CTGCAGGTTA CTTAGGTCCT
GTTGGTGTGA GTGCTGAAGT GACAATTGTT GCTGACCGTA CTGTTGCCAA TATGGCTGAC
TTTGTTTGCG GTGCTAATGA TGCAGGCCAT CACCTGACCG GCGTGAACTG GGGGCGCGAT
TTACCTGAGC CTCTGGTGCT CGACATTCGT AATGCCGTGA TTGGCGATCC TTCTCCCGAT
GGAAAAGGTG TGGTGGATAT CTGTCGCGGT ATTGAAGTGG GCCATGTATT CCAATTGGGC
ACCCGTTATT CAGAAGCAAT GGGTTGTACC TATTTGGATC AACAAGGTAA AGCCCAGCCA
ATGGTGATGG GTTGCTATGG GATTGGCGTT ACACGCTTAC TAGGCGCAGC GATTGAGCAA
GGTCATGATG AGCGCGGGAT TATTTGGCCG ATCTCTATGG CTCCGGTTGA AGTTGTGATT
TGTCCAATGG GTTACGAAAA ATCAGAGCCA GTGAAGGCAG CATGCGATCA ATTGCATGAT
GAGCTTGTTG CTGCTGGTAT CGATGTGATT CTGGATGATA GAAATGAACG ACCAGGGGCG
ATGTTTGCTG ATTGGGAGTT GATCGGCGCG CCATTCCGTG TAGTTATTGG GGACCGGGGT
TTAGCTGATT CACAGGTTGA GTTCAAAGGC CGGACAGATG CGGATTCACA AAATATTCCT
TTGGCGCAAA TCAAGGAAAA AGTGATTTCA GCTGTTCAAG CTGCAAAAAA CGCAGTCGCA
TAA
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| Protein sequence | MKASQSFLAT LKEAPSDAEV VSHKLMVRAG LIRKISAGIY NYLPLGLKVI RKVENIIREE
MNRAGAIELL MPMIQPAELW QETGRWEKMG PELLRIKDRH DRDFLIQPTS EEVITDLARN
EIRSYKQLPV NFYQIQTKFR DERRPRFGIM RGREFSMKDA YSFDRDTEGL KKSYQTMFEA
YTQIFKRMGL EFRAVTADNG AIGGSGSQEF HVIADTGEDA IVYCPSSDYA ANLEAAESLA
LNATRGAATQ TMAKVPTPDK TNCADVAKLL NLPLEQTVKS LLFAADQESG PAKLFMLLVR
GDHELNEVKA SKVPGMTESR FATETEIKQA CNAPAGYLGP VGVSAEVTIV ADRTVANMAD
FVCGANDAGH HLTGVNWGRD LPEPLVLDIR NAVIGDPSPD GKGVVDICRG IEVGHVFQLG
TRYSEAMGCT YLDQQGKAQP MVMGCYGIGV TRLLGAAIEQ GHDERGIIWP ISMAPVEVVI
CPMGYEKSEP VKAACDQLHD ELVAAGIDVI LDDRNERPGA MFADWELIGA PFRVVIGDRG
LADSQVEFKG RTDADSQNIP LAQIKEKVIS AVQAAKNAVA
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