| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0195 |
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| Symbol | rpmA |
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| ID | 5053056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 191523 |
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| End bp | 191783 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470347 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001154980 |
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| Protein GI | 145588383 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000826463 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACAGA AAAAAGGCGG CGGTTCAACA CGAAATGGCC GCGACTCAGA ATCGAAACGC
TTAGGCGTTA AGGTATTTGG CGGCGAGCAT ATTAATGCTG GCAGCATCAT CATTCGTCAA
CGTGGTACAC GTGTTCATCC GGGCGCTAAC GTTGGTATTG GTAAGGATCA CACTTTGTTT
GCCTTAATTG ACGGTCAAGT GGAATTCGGC GTTAAGGGTG CTTTGAAGAA GGCCCAGGTT
TCAGTTCTGC CTCGTTCATA A
|
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| Protein sequence | MAQKKGGGST RNGRDSESKR LGVKVFGGEH INAGSIIIRQ RGTRVHPGAN VGIGKDHTLF
ALIDGQVEFG VKGALKKAQV SVLPRS
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