| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0181 |
|---|
| Symbol | |
|---|
| ID | 5052485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 179231 |
|---|
| End bp | 179647 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640470333 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001154966 |
|---|
| Protein GI | 145588369 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.463444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACG AAAATCGTCC AGTAACTGAA GTGGCTGCAG GAATATTGCT AGATCAATCT
GGCCGCTATC TTTTAGGTCA AAGACCTGAA GGAAAACCGT ATGCTGGATA TTGGGAAGTG
CCTGGTGGAA AAATTGAAGC TGGAGAATCT GTTTTTGAGG CCCTTCGACG TGAACTTCAG
GAAGAGCTTG GTATCAATAT TCATTCAAGC GAAGAATTAA CCGTATTGGA GCATGACTAC
CCGCATGCTT ATGTACGCTT ACATGTGAGC GTCATTCGCG AGTGGTCAGG CATCCCTAAG
GGGTGTGAGG GCCAGACATT ATCTTGGGAA CTCCTTGGCG CTGAAAAACC GAGTGTTTCT
CCGCTTTTAC CTGCCGCCTG GCCAATGCTG GAAAGGCTTC GAGCCTTATT GGCCTAG
|
|---|
| Protein sequence | MNHENRPVTE VAAGILLDQS GRYLLGQRPE GKPYAGYWEV PGGKIEAGES VFEALRRELQ
EELGINIHSS EELTVLEHDY PHAYVRLHVS VIREWSGIPK GCEGQTLSWE LLGAEKPSVS
PLLPAAWPML ERLRALLA
|
|---|
| |