Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0180 |
Symbol | |
ID | 5053264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 178364 |
End bp | 179221 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470332 |
Product | hypothetical protein |
Protein accession | YP_001154965 |
Protein GI | 145588368 |
COG category | [R] General function prediction only |
COG ID | [COG2607] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.617171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAGA AATTAGACCG TTTGCTGGAG CATCTGGAAA CCTTTTTACC TAAACCTCTA AGCGACGATC AGTGGAAATC TTCGGTTGCT TTTAGATGGC GTCGTCGAGA TAGTATTTTT GGGAGCATCG GTTTTCTGCA ACCTGTAAAG CACGTTTCCG ATATTACTTT CGAAGATTTG CAAAATATCG ACCGGCAGCG CGATGCTATT CGCGACAATA CAAAAAATTT CATTCTACAA AAACCGGCGA ATAACATCCT TTTGACGGGT GCTCGCGGTA CGGGTAAATC ATCTCTAATT AAAGCCAGTT TGCATGAATT TGCCAGCCAA GGCTTGCGTC TGGTTGAAGT GGAAAAAGAG CATCTTGCAG ATTTAGCGGA TATTACTGAG CTATTGGCTG ATCGCCCTGA GCGATTCATT ATCTTTTGCG ATGATCTCTC TTTTGAGGAC GGGGAATCAG GCTATAAAGC CATGAAATCG GCTTTGGATG GTTCAGTTTC TGCCCAAGTA GACAATATTT TGATTTATGC CACCTCTAAT CGTCGCCATC TATTGCCCGA GTACATGAAA GATAACGAAG GTTATGTGCA TGGCGATGAT GGTGAGATTC ATCCGGGTGA GGTAGTGGAG GAGAAGATTT CTTTATCTGA GCGTTTTGGT TTATGGCTCT CCTTTTATCC CCCTAAGCAA GATGAGTATT TAGCAATTGT TGCCCATTGG TTAGAACATT TTGGTTTGAG TGCTCAGCAA ATCGAAGAGG CCCGACCTGA AGCATTGGTG TGGGCATTAG AACGCGGGTC TCGTTCGGGT CGTGTTGCAT GGCAATTTGC AAAACACTGG GCTGGTTCAC GCGCCTAA
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Protein sequence | MNEKLDRLLE HLETFLPKPL SDDQWKSSVA FRWRRRDSIF GSIGFLQPVK HVSDITFEDL QNIDRQRDAI RDNTKNFILQ KPANNILLTG ARGTGKSSLI KASLHEFASQ GLRLVEVEKE HLADLADITE LLADRPERFI IFCDDLSFED GESGYKAMKS ALDGSVSAQV DNILIYATSN RRHLLPEYMK DNEGYVHGDD GEIHPGEVVE EKISLSERFG LWLSFYPPKQ DEYLAIVAHW LEHFGLSAQQ IEEARPEALV WALERGSRSG RVAWQFAKHW AGSRA
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