Gene Pnuc_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0180 
Symbol 
ID5053264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp178364 
End bp179221 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content45% 
IMG OID640470332 
Producthypothetical protein 
Protein accessionYP_001154965 
Protein GI145588368 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.617171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGA AATTAGACCG TTTGCTGGAG CATCTGGAAA CCTTTTTACC TAAACCTCTA 
AGCGACGATC AGTGGAAATC TTCGGTTGCT TTTAGATGGC GTCGTCGAGA TAGTATTTTT
GGGAGCATCG GTTTTCTGCA ACCTGTAAAG CACGTTTCCG ATATTACTTT CGAAGATTTG
CAAAATATCG ACCGGCAGCG CGATGCTATT CGCGACAATA CAAAAAATTT CATTCTACAA
AAACCGGCGA ATAACATCCT TTTGACGGGT GCTCGCGGTA CGGGTAAATC ATCTCTAATT
AAAGCCAGTT TGCATGAATT TGCCAGCCAA GGCTTGCGTC TGGTTGAAGT GGAAAAAGAG
CATCTTGCAG ATTTAGCGGA TATTACTGAG CTATTGGCTG ATCGCCCTGA GCGATTCATT
ATCTTTTGCG ATGATCTCTC TTTTGAGGAC GGGGAATCAG GCTATAAAGC CATGAAATCG
GCTTTGGATG GTTCAGTTTC TGCCCAAGTA GACAATATTT TGATTTATGC CACCTCTAAT
CGTCGCCATC TATTGCCCGA GTACATGAAA GATAACGAAG GTTATGTGCA TGGCGATGAT
GGTGAGATTC ATCCGGGTGA GGTAGTGGAG GAGAAGATTT CTTTATCTGA GCGTTTTGGT
TTATGGCTCT CCTTTTATCC CCCTAAGCAA GATGAGTATT TAGCAATTGT TGCCCATTGG
TTAGAACATT TTGGTTTGAG TGCTCAGCAA ATCGAAGAGG CCCGACCTGA AGCATTGGTG
TGGGCATTAG AACGCGGGTC TCGTTCGGGT CGTGTTGCAT GGCAATTTGC AAAACACTGG
GCTGGTTCAC GCGCCTAA
 
Protein sequence
MNEKLDRLLE HLETFLPKPL SDDQWKSSVA FRWRRRDSIF GSIGFLQPVK HVSDITFEDL 
QNIDRQRDAI RDNTKNFILQ KPANNILLTG ARGTGKSSLI KASLHEFASQ GLRLVEVEKE
HLADLADITE LLADRPERFI IFCDDLSFED GESGYKAMKS ALDGSVSAQV DNILIYATSN
RRHLLPEYMK DNEGYVHGDD GEIHPGEVVE EKISLSERFG LWLSFYPPKQ DEYLAIVAHW
LEHFGLSAQQ IEEARPEALV WALERGSRSG RVAWQFAKHW AGSRA