| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0178 |
|---|
| Symbol | |
|---|
| ID | 5054010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 174912 |
|---|
| End bp | 177035 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640470330 |
|---|
| Product | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding |
|---|
| Protein accession | YP_001154963 |
|---|
| Protein GI | 145588366 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.294435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC ATTCTTTAAA AAATCAAAGC CGCCGCCAAT TTATTCAGCA AACCGCGACT
GCAGCAGGCG CTTTTGTAGT TGGGATGTAC CTACCGCTCT CTAGTGAAGC TGCAACCAGC
GCTGGTCAGC AACCAGCTTT AGCTAATGCC TGGATTCGTA TTACTCCAAG CAATCAAATT
ACCCTTATCT GCGCTCGCTC AGAGATGGGG CAAGACGTCT ACACTTCCAT GCCTGCCCTT
TTGGCAGAAG AATTGAATTT GCCTCTCTCG ATGATTCAAG TCGAGATTGC AGGTGTTGCC
CCGGTTTATA TCAATGCCTT ATTGGGCGGT CAAATTACTG GTGGTTCAAC TTCTGTGCGT
GAAGCATTTG ATAAGTTGAG AACTGCAGGC GCAGCCACAC GTTCAGTGTT GGTTGAGGCG
GCAGCACAAC GTTGGAATGT GGCTGCATCT GACTGTAAGG CAATGAATGG CAAGGTTACT
CATTCCTCCG GCAAGTCTGC GACATATGGG GAGTTAGCTG CCGATGCCGC TAAGTTACCG
CTTCCCGAGA AGCCTGCGCT GAAGTCTCCT GCTAACTTTA TGGTGATTGG TAAAGAATCC
ATGCGTCGCT TGGATACGCC AATCAAGGTG GCAGGTAAAG CTGTTTACGG AATCGATGTC
AAGATTCCAG GCATGGCAAT TGCCTCGTTG GCGCAGTGCC CTGTAATTGG TGGAACGCCG
ACATCCTATG ATGCATCTGC TGCACTTAAA GTTTCTGGCG TTATTAAAGT TGTACAGATT
TCTGATGGCG TTGCTGTATT GGCTAAAGAT TTCTATACGG CACGTAAAGG GCGAGACGCG
CTTCAAATTA CTTGGAATGA GGGTGCAAAT GCCACTCTCA GCAATGCTGT TGTTAGGAAA
TCTTTGGAAG AGGGTTTATC TAAAAAAGGT GCCGTTATCA AAACAGTGGG CGATATTAAT
GCTACCGTAG CCAATGGTAA AACGGTTAGT GCACAGTACT TTTTACCTTA CCTGGCCCAC
TCTACGATGG AGCCAGTCAA TTGCTCTGCA GATGTATCTA ATGGCAAGTG CAGAATTATT
GGACCCATCC AATTTCAACA GGGTGGTGAA GCGGTTGCTG CGGCAGCTGC AGGTGTTAAG
CCTGAGGACG TCACGATTGA AACTACCTTC TTGGGTGGTG GATTTGGGCG TAAGCTCGAG
CTGGACTTTA TACGTCAGGC CGCTGAGATT TCTAAGGCGG CTGGGATGCC CGTGAAAATG
CTGTGGACTA AAGAGGATGA CATTACTCAT GACTTCTACC GTCCAATGAG TATTCATAAA
GTGGAGGGCG TATTAGGGGC AAATGGACAA CTAGAGACCA TGAAAGCCAA GATGGTTTCG
CAATCTGTCA CTGCTCGCGC ATTCCCGGGT TTTGTAAAAG ATGGCTTTGA CCCCTTTATG
GTGGAGGGCT CAAACAACGT TACCTATGAA ATTCCAAATA TGGAGATTAC TAACGTCATT
ACAGATACTG GTGTTCGGGT AGGTTATTGG CGTTCTGTGA GTAACGCGCT AAATGCATTT
GCTATCGAGA GTTTTGTTGA TGAAGCAGCA AAAGCTGCGG GTAAGGACCC TGTAGCGTTT
CGCTTAGCGT CTCTTGATAA GCATCCACGA GCAAAGGCAG CTTTGGAATT GGCTGTTAAA
AAGTCAGGCT ATTCTGCCAG CAGCAAGCGT TTTGGCGTAG CCCAGATGGA ATGCTATGAC
ACCTACTCCG CATGTGTAAT TGAATTGGAT CCTACTGCTA GCAGCACAAA GGTAAAGAAG
GTCACTTTTG TTTCCGATTG CGGTATTGCT GTGCACCCAG ACCAAGCCCG GGCTCAACTG
ACTGGTGGTG TGATTTATGG ACTTAGTGCT GCTTTAGCTA ATGAGATCAC TATTGAAAAT
GGACGTATTC AGCAAAACAA TTTCAATAAC TATCCTAGCT TGCGTCAAAA TCAAGTTCCG
ATTGTTGAGG TGCATCTCAT CCCCAGCCAG GAAAAACCAG GTGGGTTGGG CGAGGTTGGC
GTACCTTTGG TGGCGCCGGC ATTGGCTAAT GCCATTGCGG CAGCTACTGG TAAGCGGATA
CGGGAATTAC CAATAAAAGC GTAA
|
|---|
| Protein sequence | MKNHSLKNQS RRQFIQQTAT AAGAFVVGMY LPLSSEAATS AGQQPALANA WIRITPSNQI
TLICARSEMG QDVYTSMPAL LAEELNLPLS MIQVEIAGVA PVYINALLGG QITGGSTSVR
EAFDKLRTAG AATRSVLVEA AAQRWNVAAS DCKAMNGKVT HSSGKSATYG ELAADAAKLP
LPEKPALKSP ANFMVIGKES MRRLDTPIKV AGKAVYGIDV KIPGMAIASL AQCPVIGGTP
TSYDASAALK VSGVIKVVQI SDGVAVLAKD FYTARKGRDA LQITWNEGAN ATLSNAVVRK
SLEEGLSKKG AVIKTVGDIN ATVANGKTVS AQYFLPYLAH STMEPVNCSA DVSNGKCRII
GPIQFQQGGE AVAAAAAGVK PEDVTIETTF LGGGFGRKLE LDFIRQAAEI SKAAGMPVKM
LWTKEDDITH DFYRPMSIHK VEGVLGANGQ LETMKAKMVS QSVTARAFPG FVKDGFDPFM
VEGSNNVTYE IPNMEITNVI TDTGVRVGYW RSVSNALNAF AIESFVDEAA KAAGKDPVAF
RLASLDKHPR AKAALELAVK KSGYSASSKR FGVAQMECYD TYSACVIELD PTASSTKVKK
VTFVSDCGIA VHPDQARAQL TGGVIYGLSA ALANEITIEN GRIQQNNFNN YPSLRQNQVP
IVEVHLIPSQ EKPGGLGEVG VPLVAPALAN AIAAATGKRI RELPIKA
|
|---|
| |