| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0163 |
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| Symbol | |
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| ID | 5052855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 156874 |
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| End bp | 158319 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640470315 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001154948 |
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| Protein GI | 145588351 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCTA TGACAACGCT TGCTCAGGTC CATGCCATGT TGCCTGGAAG TATTTTAGTG
AATATCTCTC TTGAAGCAGC TCAAGCTTTG TCAATTACTC GCGTAGGTAC AGATAGTCGT
CAAATTGACG CGGGTGAATT ATTTGTAGCA TTGGCTGGTG AGCGCTTTGA TGCTCATGAT
TTCTTATCTG ACGTTGCGAG TTCTGGGGCT GGCGCAGCCT TAATTAGCAA TAAAGATAAA
TGCCCCAAAA ATTTACCGGC GGTATGCATA GAAGATACAC GCGCTGCATT AGGCCAGTTG
GCAAAAGCTT GGAGAGTGAC ACGCCACATT CCATTGGCCT TAGTTACAGG TAGCAATGGT
AAGACCACAG TCAAAGAAAT GATTGCCTCA ATTTTTAAGG CGGCTGTTGG CGAAAGCCAT
ACTTTGGTTA CCAAGGGTAA TTTAAATAAT GACATTGGCT TACCGCTTAC CTTATTGAAG
TTAAGGCCTA CAGATCAGCT GGCAGTCGTT GAGTTGGGTA TGAATCATCC TGGCGAAACT
GCTCTGTTAG CTGATATAGC CCAAGCAAAT ATTGCATTAA TTAATAATGC TCAGCGCGAG
CATCAGGAGT TTATGGCTAC AGTTGCAGCA GTTGCTCAAG AGCATGCTGA TGTAATTCGC
GCTTTACCTC AAGATGGAAT TGCAGTATTT CCAGGCGATT CTGAGTTCAC TGACCTTTGG
CGTAAAGCAG CCGCAGACCG CAAGGTACTA GATTTTGTGT TGTCATCTAC ACAAACAAAT
GCCTCTTCCG CAGTAGGTGG AAAATTACTG AATGATGGTC GCATAGAAGT AAATACTGAA
AATGGAAGCA TCCAAATTCA GCTAAATACT TTAGGAAACC ATAATGTACG CAATGCGCTA
GCGGCTAGTG CGGTTGCGAT CGCTGCTGGC ATCAGTCTTA AAAAGATTCA AGAAGGCCTT
GAATCATTCC AGCCCGTTAA TGGGCGTATG CAAGCCAAGA CAATTGATGC AAATCACACA
TTAATTGATG ATAGCTACAA CGCTAATCCA GATTCAGTTC GTGCTGCAAT TGATGCATTA
AAACAGTCTG GTAACAATGC CTGGATAGTA TTAGGTGATA TGGGCGAGGT AGGGGATCAA
GGTCCAGAAT TTCATCAAGA AGTGGGTGCA TATGCTGCTG AGCAAGGCAT CTCTAAATTG
TTTGCTCTTG GTGAGCAATG TCAATTCGCC ATTCAGGGTT TTGAGAGTGC GAAAGGAAAG
AGTGCGCTAT CTAGCGCTAC TCATTTTTCT AATATGGATA GTCTTATTGC GCAATTACGC
GATGCATTAC ATGCACAAGC GTTGGGTACT AATCAACACT TGAACATTTT GGTTAAGGGA
TCACGATTTA TGCGCATGGA GCGTGTAGTA CAAGCCTTAC TCGAGGAGGC TAAAGCATGC
TCTTAA
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| Protein sequence | MSAMTTLAQV HAMLPGSILV NISLEAAQAL SITRVGTDSR QIDAGELFVA LAGERFDAHD
FLSDVASSGA GAALISNKDK CPKNLPAVCI EDTRAALGQL AKAWRVTRHI PLALVTGSNG
KTTVKEMIAS IFKAAVGESH TLVTKGNLNN DIGLPLTLLK LRPTDQLAVV ELGMNHPGET
ALLADIAQAN IALINNAQRE HQEFMATVAA VAQEHADVIR ALPQDGIAVF PGDSEFTDLW
RKAAADRKVL DFVLSSTQTN ASSAVGGKLL NDGRIEVNTE NGSIQIQLNT LGNHNVRNAL
AASAVAIAAG ISLKKIQEGL ESFQPVNGRM QAKTIDANHT LIDDSYNANP DSVRAAIDAL
KQSGNNAWIV LGDMGEVGDQ GPEFHQEVGA YAAEQGISKL FALGEQCQFA IQGFESAKGK
SALSSATHFS NMDSLIAQLR DALHAQALGT NQHLNILVKG SRFMRMERVV QALLEEAKAC
S
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