| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0149 |
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| Symbol | |
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| ID | 5053289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 142881 |
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| End bp | 143606 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640470301 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001154934 |
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| Protein GI | 145588337 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAGCC AAAAAATACC ATCAAATCGC CAATTTCTTA TTGCCCCCTC TATTTTGTCG
GCAGACTTTG CCTGCCTAGG CAAAGAAGTA CAAGACGTTT TAGCGGCTGG GGCCGATTGG
ATTCATTTCG ATGTGATGGA TAACCATTAC GTCCCCAACC TCACGATTGG CCCTTTGGTT
TGTGAGGCCA TTCGTCCGTA TGCCATGAAA AATGGTGGGG CTGCCGTTAT TGACGTTCAC
TTAATGGTTG AGCCAGTGGA TCGCATCGTG CCCGATTTTG CCAAAGCGGG TGCAAATCTC
ATTAGCTTTC ACCCCGAAGC GAGCCCGCAT GTCAACCGCA CACTAAATCT CATTCGTGAT
CAAGGATGTC AGGCAGGGCT CGTACTCAAT CCAGCTACAC CACTAGATCA CTTAGATCAC
ACCTTGGAAT TACTCGACCT GGTATTACTT ATGTCAGTGA ACCCCGGGTT TGGCGGTCAA
TCATTCATTC CAAGTACCTT ACATAAAATC GCTCAAGTGC GTGCACGCTT AGATCGTCAT
GAAGCGGAGA CTGGTCGACA GATTCGTCTT GAGGTAGATG GCGGCATTAA AGTAGATAAC
ATTGCACAAG TGGCGCAAGC AGGCGCAGAT ACTTTTGTTG CGGGCTCAGC CATTTTTGGC
AAAGAAAATT ATGCGCAAGT GATCGATGCG ATGCGCGCTG AATTAGGAAA GCTAGGAAGA
GCCTAA
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| Protein sequence | MESQKIPSNR QFLIAPSILS ADFACLGKEV QDVLAAGADW IHFDVMDNHY VPNLTIGPLV
CEAIRPYAMK NGGAAVIDVH LMVEPVDRIV PDFAKAGANL ISFHPEASPH VNRTLNLIRD
QGCQAGLVLN PATPLDHLDH TLELLDLVLL MSVNPGFGGQ SFIPSTLHKI AQVRARLDRH
EAETGRQIRL EVDGGIKVDN IAQVAQAGAD TFVAGSAIFG KENYAQVIDA MRAELGKLGR
A
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