| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0145 |
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| Symbol | trpC |
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| ID | 5053132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 138979 |
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| End bp | 139782 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470297 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_001154930 |
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| Protein GI | 145588333 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.694484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGATA TCCTCGACAA AATTGTTGCC ACAAAAAAAA TAGAAGTAGC CCATAACTCA
TCAAAAATTT CCCTTGGAAA TCATCGCGAG CAAGCTGAAG CTAATAACCA AAGTAATCTT
TTAAAGCCCA GAGGCTTTAT TCAGGCGATA GAGCGCAAAA TTTCAGCAGG GAAGGCTGGG
GTGATTACCG AGGTAAAAAA AGCAAGCCCA AGCAAAGGGA TCTTGCGAGA AAATTTTATC
TCCGCAGAAA TCGCGCAGTC TTATGAAAAA CATGGCGCTG CTTGCTTATC GGTTCTCACT
GATAGTGATT ATTTTCAGGG ATGTAACGCC TACCTTCAGG AAGCTCGAGC TGCTTGCCAG
ATTCCAGTTC TTCGCAAAGA TTTCACTATC GATCCATATC AAATCTATGA GGCCAGAGCT
ATCGGGGCAG ATGCCATCTT ATTGATTGTG GCCTGCCTTG AACTCAACCA AATGATGGAG
CTCGAAGCCT GTGCTCATGA ATTGGGTTTA GATGTATTGG TAGAAGTTCA TAACGCGCCC
GAATTAGAGC AAGCGCTAGA GTTAAAGACG CCATTGTTGG GCATCAATAA CCGCAATCTC
AAAACATTTG AAGTGAGCTT GCAAACCACT CTCTCACTCC TATCTTCAGT GCCCAAGAAT
AAAACTTTGG TTACTGAATC CGGCATCTTA AGTCGCGCCG ATGTTGAGTT AATGCGTAAG
AATCAGATAA ACGCCTTTTT GGTTGGCGAG GCTTTCATGC GTGCACCAGA CCCGGGCACC
GCACTTAGCG AGCTCTTTGC TTAA
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| Protein sequence | MSDILDKIVA TKKIEVAHNS SKISLGNHRE QAEANNQSNL LKPRGFIQAI ERKISAGKAG
VITEVKKASP SKGILRENFI SAEIAQSYEK HGAACLSVLT DSDYFQGCNA YLQEARAACQ
IPVLRKDFTI DPYQIYEARA IGADAILLIV ACLELNQMME LEACAHELGL DVLVEVHNAP
ELEQALELKT PLLGINNRNL KTFEVSLQTT LSLLSSVPKN KTLVTESGIL SRADVELMRK
NQINAFLVGE AFMRAPDPGT ALSELFA
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