Gene Pnuc_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0144 
Symbol 
ID5053839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp138429 
End bp138998 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content40% 
IMG OID640470296 
Producthypothetical protein 
Protein accessionYP_001154929 
Protein GI145588332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.375594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAAA TTTCTTTTTT ACCTTCTGAA TGGTTTGTTG GCATAGTGGT TAGTGCCTTG 
TCTTATGCGA CCCTTTTTTA TATTAATTCT TGGCTTACTG GTAGCTTAAT TTACAGCTTG 
GGAGTGAATT GGATTTATCT GCCAGCAGGC TTACGTCTTT TTATAACCTT AATCTTTGGC 
TTGCCAGGGG CCATTGGAAT TGCCCTAGCT ACATTTACCA TTAGCTATTT TGGAGCGCTT 
CCTCAAGATC TAACCCTGTG CATTGGAACT GGTTTAATTT CCGGATTCGC TCCCTATTTG 
GCAAGAGTAT TAATACTTAG CAATACGCAG CTTGCGCCTG ATTTAAGTAA TTTAAATTTA 
CCCAAGTTGG TAATCTGTAT CTTGCTCTAC GCCCTACTAT CTGCAGGGCT GCACCAATTT 
TGGTATGCAA CCATGGCCCT TGATGGGGCG GGTACCCCAA ATCACTTTTT AGTCATGTTT 
ATTGGAGATG TATTTGGATC TTTATTGCTG ATTTCAGTAA TCAAATATGG GCTTGATCTA 
CTCAGGCATT TTAAGCAAAG AGCTCGCTAA
 
Protein sequence
MPKISFLPSE WFVGIVVSAL SYATLFYINS WLTGSLIYSL GVNWIYLPAG LRLFITLIFG 
LPGAIGIALA TFTISYFGAL PQDLTLCIGT GLISGFAPYL ARVLILSNTQ LAPDLSNLNL 
PKLVICILLY ALLSAGLHQF WYATMALDGA GTPNHFLVMF IGDVFGSLLL ISVIKYGLDL 
LRHFKQRAR