| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0141 |
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| Symbol | |
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| ID | 5053411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 135485 |
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| End bp | 136759 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640470293 |
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| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
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| Protein accession | YP_001154926 |
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| Protein GI | 145588329 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.190003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATG CGAACCAAAA ACATTCATCC AAAACCCCAG CGAATTCGCC TCAAATTCGC
ACTGCAGATG TCGTTGTGGT GGGCGGAGGC ATAGCCGGCA AGGCTTGCGC CTTAGGCCTG
GCGCAATTAG GCCTTCAAAC AGTAGAAATT GCCCCCGATC TCCATCAAGC AGTGCCCACC
CCACAAAGCA GTCAATGGGG TCAAAGAATT TATGCTTTTT CGCCAAGCAC CCAAAAATTA
CTTGCCCATC TCCAAATTTG GGACGCTCTA GACCATAGTC GCCTCCAAGC TGTACGCGAC
ATGCGAATTT ATGGCGATCG TGGCGAGAAA AGTGATCACC TCCATCTCTC TGCCTTTGAA
GCAGGCACGC CTCAGCTCGC ATGGATTGGT GAATCTAATT TAATTGAGCA CACCTTAGAT
CAAGCAGCGC GCTTTCAAAG TAAATTAGAG CGCATGAATG ATGCTGTAGA AAAAATAGAG
GTTGATACAG ATGGAGCAAC CCTTCATCTA AAAAGTGGAG GCACTATTCG CACGCAACTC
GTCATTGCAG CAGATGGAGC AAGCTCACCC ATTCGCAATC ACCTTGGAAT TAACACCACT
GAAGAGAGCT ATTTACAAAG TGCTGTAGTG GCAAATTGGT TTTGCACTTA TCCCCATCTT
GAAACTGCTT TTCAATGGTT CTTGCCGGGC GGAGATATTG TTGCCATGCT CCCGTTACCC
AACAAGCAAG TATCCATGGT GTGGTCAACT TCCCCAGAAA ATGCCGCTGA GCTTCTCAAG
CTTGATGCCT CTGGCTGGCA AAGCCGTTTT GAATCGATCG CCAATGGCGC GATTCTGAAA
CAGTTAGGCG AGCTCACGCT GAACTCCAGC CCTGCAGCGT TTCCACTGCG CAAAATCAGG
GCTGCCCGCT TTATTGGCCC AGACTCGTCT CCTAAAGTAG CCCTCATTGG AGATGCCGCT
CATGTGATGC ATCCATTGGC TGGGCAAGGC TTAAATCTAG GTTTAAGGGA TGTTGCCGTG
TTGCTCAATA TTCTTGGTAA GCGCGAATCT TTCCGTGCGG TAAATGACTT AACACTACTG
CGTCGTTATG AACGTCAACG CCAAGGCGAC ACTAGCGCAT TACTATGGGT CACAGATAAA
CTAAAAAAAT TATTTTCTGG TAGCAGCAGT ACGGAGAAGC GGTTACGTAA CTGGGGTCTT
GGGCTTGTGA ATAAAAGCCA CTTTATTAAA CAGCGGCTCA TTGAACGCGC CTTAGGAGAC
ATTCATTTTG ATTAA
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| Protein sequence | MSDANQKHSS KTPANSPQIR TADVVVVGGG IAGKACALGL AQLGLQTVEI APDLHQAVPT
PQSSQWGQRI YAFSPSTQKL LAHLQIWDAL DHSRLQAVRD MRIYGDRGEK SDHLHLSAFE
AGTPQLAWIG ESNLIEHTLD QAARFQSKLE RMNDAVEKIE VDTDGATLHL KSGGTIRTQL
VIAADGASSP IRNHLGINTT EESYLQSAVV ANWFCTYPHL ETAFQWFLPG GDIVAMLPLP
NKQVSMVWST SPENAAELLK LDASGWQSRF ESIANGAILK QLGELTLNSS PAAFPLRKIR
AARFIGPDSS PKVALIGDAA HVMHPLAGQG LNLGLRDVAV LLNILGKRES FRAVNDLTLL
RRYERQRQGD TSALLWVTDK LKKLFSGSSS TEKRLRNWGL GLVNKSHFIK QRLIERALGD
IHFD
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