| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0139 |
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| Symbol | |
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| ID | 5052957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 132983 |
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| End bp | 134767 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470291 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_001154924 |
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| Protein GI | 145588327 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.554746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATC TCCCAGCGAT CCAATACACC GTTTGGCCAG CAGATCCACA TGGTCACCGT
TTTCAGGTAA AGCTTCATAT TGCTAACCCC AATCCAGATG GGCAAGTAAT CAAGATGCCA
GCCTGGATTC CTGGTAGTTA TTTAATTCGG GATTTTTCAA AACAGATTGA AGCTATTGAT
GCCTATATAG CCGGCAGTAC AAAGCAAAAA ATTGCGCTTG AGCGCATCGA TAATGATCGA
TGGCGACTCC CAAGAAATGC TGGTGCTGTC GATATTTTGA CAACCGTTTA TGCCTTTGAC
TCATCGGTTC GCGCAGCCTA CCTAGATACC GAGCGCGCCT TTTTTAATGC CACCAGCCTA
TGCTTGGCTG TAGAAGGCCA GGAAGACCTT CCTTGCTCGC TGGCGATTAC CCCAGCAGAG
GGCGCCTTTG CAGATCATTG GACTGTGCAA ACCAGCTTAC GAGCTGCAAA GACGGATAAA
AATGGCTTTG GATTTTATCT AGCGAAAAAT TTTGATGACT TGATAGATCA CCCAGTGGCA
ATCGGCGAAT TTCAAACGGT CCAATGGATG TCTGGCAGCG TTCCACATAG CATAGCTATT
CAAGGATGTA TTCATCCGAT TGATAGCGCT CGCCTTGCTC AAGATCTTCA AGCAATTTGC
AATTCCACCA TCAATCTTTT TGAACCTAAA TCCAAGCAAC CGCCATTTAC GCATTATTTA
TTTTTAGTCA ATACTGTTCT GAATGGATAT GGCGGTCTGG AACACCGCAA TAGCACAGCA
CTTCTATGCC GACGCGATCA GATTCCGCAA GCGAATGTGC CCCTCGAAGA AGATGCATAT
CGAGAATTTC TAGGTTTGTG CAGTCACGAA TATTTTCATG CGTGGCTTGT TAAGCGCATT
AAACCTCAAG CGTTTCAACC TTACCATCTC AGCCAAAGAA ACCACACTAG GCTGCTTTGG
TTTTTTGAAG GCTTTACTAG CTACTATGAC GATCTCCAGC TATTCCGCAG CAAACGTATT
GATCTTGTCA CGTATTTAAA GCTGGTTACC AATAATTGGA ATGGTGTTTT ACGAGGACCC
GGTAGGCACA AACAAAGCTT GGCCGATAGT TCTTTTGATG CCTGGACGAA GTACTATCAG
GCAGATGAAA ACACCCCTAA TGCAGTAGTG AGCTACTACG GTAAGGGGGC TTTGGTTGCT
CTTGGCCTTG ACTTACAAAT TAGAGCCTTC TCCAGCAATA AAAAATCCTT AGATGATTTA
ATGCGTTTAA TTTGGCAACG ACATGGAATC ACCTTAGCAG GAATTGGGGA GGACGGACTA
GATCAATTGA TATTGCAATT GCTCGGGAAT GGATTTACTA AAACTTGGAA TGAAATCAAG
GCTCGATATA TTTTTGGAGT CGAAGACATC CCTTTGCAAA AATGGATTGC CTCCACATTG
GTCCGAGTAA AACCAAAACA TCAAAGCTCG CTAGAAAAAC TCAAACTGCA GCTGGGCATC
CGCCATACCG ATGTAAACGG CTGGATCAAA ATTACCCATA TCCTAGATGG TGGGGCCGCA
CAGGCTGCAG GCCTTGCACC CGGAGACCTC TTAGCTAGTA TGAATGGTCA ACGCATTACC
CCAACCCGAT GGGATAGCGT CTTGAATAGC CTTGCTAAAG AACAAAGCTT TGCCATATTG
TTTTATCGGG ATGATTTAGA GCATGAGCGT ATTGTGATGT TGGAGTCATC CCAACTGCCA
TTGCAATATG AATTAAGTCC TTCATCAGAC TCAAAATCTA ATTAA
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| Protein sequence | MADLPAIQYT VWPADPHGHR FQVKLHIANP NPDGQVIKMP AWIPGSYLIR DFSKQIEAID
AYIAGSTKQK IALERIDNDR WRLPRNAGAV DILTTVYAFD SSVRAAYLDT ERAFFNATSL
CLAVEGQEDL PCSLAITPAE GAFADHWTVQ TSLRAAKTDK NGFGFYLAKN FDDLIDHPVA
IGEFQTVQWM SGSVPHSIAI QGCIHPIDSA RLAQDLQAIC NSTINLFEPK SKQPPFTHYL
FLVNTVLNGY GGLEHRNSTA LLCRRDQIPQ ANVPLEEDAY REFLGLCSHE YFHAWLVKRI
KPQAFQPYHL SQRNHTRLLW FFEGFTSYYD DLQLFRSKRI DLVTYLKLVT NNWNGVLRGP
GRHKQSLADS SFDAWTKYYQ ADENTPNAVV SYYGKGALVA LGLDLQIRAF SSNKKSLDDL
MRLIWQRHGI TLAGIGEDGL DQLILQLLGN GFTKTWNEIK ARYIFGVEDI PLQKWIASTL
VRVKPKHQSS LEKLKLQLGI RHTDVNGWIK ITHILDGGAA QAAGLAPGDL LASMNGQRIT
PTRWDSVLNS LAKEQSFAIL FYRDDLEHER IVMLESSQLP LQYELSPSSD SKSN
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