| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0135 |
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| Symbol | |
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| ID | 5053855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 128668 |
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| End bp | 129519 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470287 |
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| Product | HemK family modification methylase |
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| Protein accession | YP_001154920 |
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| Protein GI | 145588323 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000756986 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCTG ATTTAACTCT ACGCTCTTTA CTAGGCAACT CTCAGCTTCC ACCAAATGAA
GCGCGTATTT TGATGGCACA CATACTCGAG AAGCACTATG CCCTACCTCG TTCTGCCCTA
CTCTCGCGTG ATGATATGGC GCTTGAGGTT CAAGCACTTG CCCATTGGAA AGAGTTGGAG
TCAAAGAGAT TGGATGGCGA GCCGATCGCT TACCTGATTG GCAAAAGGGG ATTCCATAAT
ATTGAGTTGC AAGTTGCCCC TGGTGTTTTG ATTCCGCGCG CAGAAACTGA ACTATTAGTA
GATATCGGAT TAAAAGAGAT CGCTCGCTTA ACTGATAACC AAAAGATGGT TAAGGTACTT
GACCTAGGAA CAGGCTCAGG TGCTATTGCT CTAGCCTTAA CCCATGAGGC CTCCAATATA
TCTGTCACCG CAACCGATCA ATCATTGGAT GCCTTAGCAA TTGCGCGGTC TAATGCGCAT
TATTTAGAAC TTGAAAATCG CGTGTGTTTT GCCCAAGGCA ATTGGTATGA GGCTATCAGT
AAAAATGATG TCTTTGACAT CATCCTTAGC AATCCACCCT ATATTGCCAA TCATGATCCC
CATTTAACCC AGGGGGATCT TCGCTTTGAA CCGCTTTCTG CACTGACAGA TCACAGCACT
GGACTCACCT GCTTGGAGAC TATTATTTTT GGCGCCAAGG CACACCTCAA TACTGAGGGG
CTTCTAGCTG TAGAACATGG TTTTGATCAA TCAGAGGCCG TTGTTGAGCT AATGAGAACC
GCTCAATTGA AGGATATTCA AATCCATCTC GATTTAGCCG GGCACAACAG GGTTGTTTCA
GGCAGAAAAT AA
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| Protein sequence | MSSDLTLRSL LGNSQLPPNE ARILMAHILE KHYALPRSAL LSRDDMALEV QALAHWKELE
SKRLDGEPIA YLIGKRGFHN IELQVAPGVL IPRAETELLV DIGLKEIARL TDNQKMVKVL
DLGTGSGAIA LALTHEASNI SVTATDQSLD ALAIARSNAH YLELENRVCF AQGNWYEAIS
KNDVFDIILS NPPYIANHDP HLTQGDLRFE PLSALTDHST GLTCLETIIF GAKAHLNTEG
LLAVEHGFDQ SEAVVELMRT AQLKDIQIHL DLAGHNRVVS GRK
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