Gene Pnuc_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0127 
Symbol 
ID5054013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp121951 
End bp122724 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content45% 
IMG OID640470278 
Productcytochrome c1 
Protein accessionYP_001154912 
Protein GI145588315 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0525293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAA TTCTGCAAAC TTTGATGGGT GTCTGCCAAG CAACATTGTT GGTTGCTGCC 
CTTGGCCTTG GTGCTAACGC CAATGCAAAT GAAGGCGGCT TTCCATTGGA TGCCGCCCCT 
AATCGCGTAA GCAACAATGC TTCATTACAA AATGGTGCAA AGTTATTTGT GAACTATTGC 
TTAAACTGCC ATGCAGCTAC TAGCATGCGT TACAACCGCT TACGCGATAT TGGCTTGACT 
GATCAGCAAA TCAAAGACAA CCTCATTTTG AATGATGCCA AAGTTGGCGA TTTGATGACG 
ATCTCCATGA CACCAAAAGA GGGTAAGGCA TTCTTTGGCA AGAATCCCCC CGACCTTTCT 
GTAGAAGCTC GTGCACGTGG AACAGATTGG CTGTATACCT ATCTGCGCAC TTTCTATAAA 
GATGACACCA CACAAACTGG TTGGAATAAT TTGGTTTACC CAAAAGTCGG CATGCCTCAT 
GTGCTTTGGC AGCTACAGGG TGAGCGTGCA GCTAAGTTTG AGGAGCACAA AGATCCACAT 
GATGAAAGCA GAACAGAAGA GGTTTTTGTT GGCTTTGAAC AGTTAACTCC TGGCACGATG 
AAGCCTCAAG AGTACGATGA CAATATTGCC GACTTGGTTG CCTTTATGTC ATGGATGGCT 
GAGCCAGTAC AGTTAGAGCG TAAACGCCTG GGCGTTGTTG TTCTCTTGTT CTTGGCCATC 
TTTACTCTCT TAGCTTGGCG CTTGAATAAA GCCTATTGGA AAGATATCCA CTAA
 
Protein sequence
MKRILQTLMG VCQATLLVAA LGLGANANAN EGGFPLDAAP NRVSNNASLQ NGAKLFVNYC 
LNCHAATSMR YNRLRDIGLT DQQIKDNLIL NDAKVGDLMT ISMTPKEGKA FFGKNPPDLS 
VEARARGTDW LYTYLRTFYK DDTTQTGWNN LVYPKVGMPH VLWQLQGERA AKFEEHKDPH 
DESRTEEVFV GFEQLTPGTM KPQEYDDNIA DLVAFMSWMA EPVQLERKRL GVVVLLFLAI 
FTLLAWRLNK AYWKDIH