| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0118 |
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| Symbol | |
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| ID | 5052494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 110140 |
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| End bp | 110916 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640470270 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001154904 |
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| Protein GI | 145588307 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.876594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAGA ACAACGCCAC TGAAGATTCG GGATTGCAGG AATCTTTTTT ATCTCACTTA
TTTGAGTTAC GTGATCGCGT TATTAAAGCG GGTTTAGCCA TCATTGTCGT TTTTGCTTGC
TTGGTCTATT GGGCGCCAGA TATTTTTCAT TTGTTTGCTC AGCCCTTATT AAGTGCCTTA
CCCGCTGGCG GTAAGATGAT TGTGACCGAT GTCACCGGTT CTTTTTTTGT GCCGATGAAA
GTCACGATGG TGGTGGCATT CATTATTGCC CTGCCTGTGG TGATGTATCA GCTGTGGGCT
TTTATTGCTC CCGGACTGTA TTTACATGAG CGCAAACTGA TATTGCCTTT GGTGGTGAGT
AGTTACACCT TATTCATTAT TGGTATGGCG TTTGCTTATT TCTTGGTATT CCCGACAGTC
TTTAAATTCA TGGCTAGTTA TAACGCTCCA CTGGGAGCCG AAATGTCTAC TGACATTGAT
AACTATCTCA GTTTTGCTAT GACGACTTTC TTGGCCTTTG GTATTACATT TGAAGTGCCT
GTAGTCGTGG TGGTATTGGT GCGGATGGGC ATAGTGCCAT TATCCAAGTT ACGAGAAATT
CGTCCCTATG TGATTGTGGG GGCTTTTGTT ATCTCGGCAG TCGTAACTCC ACCAGACGTG
CTATCGCAAT TACTTTTGGC TGTACCGATG ACCTTGCTAT ATGAGCTCGG CTTATTGGTT
GCCCGTATGT ATGTACCTAA ACCGTCAGAA GATGAGGTAG TTAGACCTAC CGATTGA
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| Protein sequence | MTENNATEDS GLQESFLSHL FELRDRVIKA GLAIIVVFAC LVYWAPDIFH LFAQPLLSAL
PAGGKMIVTD VTGSFFVPMK VTMVVAFIIA LPVVMYQLWA FIAPGLYLHE RKLILPLVVS
SYTLFIIGMA FAYFLVFPTV FKFMASYNAP LGAEMSTDID NYLSFAMTTF LAFGITFEVP
VVVVVLVRMG IVPLSKLREI RPYVIVGAFV ISAVVTPPDV LSQLLLAVPM TLLYELGLLV
ARMYVPKPSE DEVVRPTD
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