Gene Pnuc_0117 details

Gene Information

• Locus tag: Pnuc_0117
• Symbol: tatB
• ID: 5052601
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 109645
• End bp: 110121
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640470269
• Product: sec-independent translocase
• Protein accession: YP_001154903
• Protein GI: 145588306
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1826] Sec-independent protein secretion pathway components
• TIGRFAM ID: [TIGR01410] twin arginine-targeting protein translocase TatB

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGATT TAGGTGTTTC AAAGCTTGCG CTAATCGCAG TTGTTGCTCT TGTGGTGGTT 
GGCCCAGAGC GATTACCAAA AGTAGCTCGC ATGGCTGGTA ATTTATTTGG CCGTGCTCAG 
AGATATATGG CGGACGTTAA ATCTGAAGTC AATCGTCAGA TGGAAATTGA GGAGTTTAAA 
AAATTCCGAG AAGAAACGAC TTCAGCGCTA AAAGAAGTTG AGAATAGTAT TGGCTCTGTT 
GCAAAAGAAG CTAGCGGTAA TTTGACCGAC CAAGCCGATA TTTTCGAAAC CAGTTTTGAA 
AAGCCCCCTC TCGATGAAAA AGAGGTAATG CGTAAAACCA AGCGCCAGGG TCGCAACAGC 
TGGGGTGTTA GGCGTGCTGC CAGGCCGCTG TGGTTCAAGC GCTCTTCTGG TATGCGTACT 
CGCATTCAGT CAGGCGCTGC CAGAATGAAG CGTTTCCATC ATGCAGCTGG CAAGTAA 

 

Protein sequence

MIDLGVSKLA LIAVVALVVV GPERLPKVAR MAGNLFGRAQ RYMADVKSEV NRQMEIEEFK 
KFREETTSAL KEVENSIGSV AKEASGNLTD QADIFETSFE KPPLDEKEVM RKTKRQGRNS 
WGVRRAARPL WFKRSSGMRT RIQSGAARMK RFHHAAGK