Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0114 |
Symbol | |
ID | 5053193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 108585 |
End bp | 108986 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640470266 |
Product | phosphoribosyl-ATP pyrophosphohydrolase |
Protein accession | YP_001154900 |
Protein GI | 145588303 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGTC CTACTAATAA ATCCATCAAT GTAGATACAG GATTAGCCCA TTTGGCTGAT GTTGTGGATC AGCGTCGAGA TGCCTTTAAG GCCGGCTCTG CAGACCCTAA AACTTCCTAT ACTGCTTTGC TCTTTTCCAA GGGTGATGAT GGAATCCTCA AAAAGATTGG TGAAGAGGCA ACCGAGGCTG TAATGGCGGC TAAAGATGCG CGCAATTCTA ATTTGGCTGC TGAGCAGCAA AAGCTCCTCA TAGGCGAGAT GGCAGATCTC TGGTTTCATT GCCTGATTGC GCTGTCGCAA TTCAACTTGC GTCCTGAGGA TGTCATTGCG GAATTAGATC GTCGCCTGGG TACCTCAGGC ATCGAGGAAA AGGCTGCTAG AAAAGCCGCA AACCCAGAAT AA
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Protein sequence | MSSPTNKSIN VDTGLAHLAD VVDQRRDAFK AGSADPKTSY TALLFSKGDD GILKKIGEEA TEAVMAAKDA RNSNLAAEQQ KLLIGEMADL WFHCLIALSQ FNLRPEDVIA ELDRRLGTSG IEEKAARKAA NPE
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