Gene Pnuc_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0114 
Symbol 
ID5053193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp108585 
End bp108986 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content48% 
IMG OID640470266 
Productphosphoribosyl-ATP pyrophosphohydrolase 
Protein accessionYP_001154900 
Protein GI145588303 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTC CTACTAATAA ATCCATCAAT GTAGATACAG GATTAGCCCA TTTGGCTGAT 
GTTGTGGATC AGCGTCGAGA TGCCTTTAAG GCCGGCTCTG CAGACCCTAA AACTTCCTAT
ACTGCTTTGC TCTTTTCCAA GGGTGATGAT GGAATCCTCA AAAAGATTGG TGAAGAGGCA
ACCGAGGCTG TAATGGCGGC TAAAGATGCG CGCAATTCTA ATTTGGCTGC TGAGCAGCAA
AAGCTCCTCA TAGGCGAGAT GGCAGATCTC TGGTTTCATT GCCTGATTGC GCTGTCGCAA
TTCAACTTGC GTCCTGAGGA TGTCATTGCG GAATTAGATC GTCGCCTGGG TACCTCAGGC
ATCGAGGAAA AGGCTGCTAG AAAAGCCGCA AACCCAGAAT AA
 
Protein sequence
MSSPTNKSIN VDTGLAHLAD VVDQRRDAFK AGSADPKTSY TALLFSKGDD GILKKIGEEA 
TEAVMAAKDA RNSNLAAEQQ KLLIGEMADL WFHCLIALSQ FNLRPEDVIA ELDRRLGTSG
IEEKAARKAA NPE