Gene Pnuc_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0108 
Symbol 
ID5052306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp104079 
End bp105146 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content45% 
IMG OID640470260 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_001154894 
Protein GI145588297 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.346201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTT TTTGGAGCCC TGTCGTTCAA ACCTTAACCC CCTACGTTCC AGGGGAGCAG 
CCGCAAATGC AACGGTTGGT CAAACTCAAC ACGAATGAAA GCCCATATGG TCCATCTGCA 
AAGGCTCTTG CTGCCATTCA GAGTCAAACA AACGATGATT TGCGACTTTA TCCAGATCCA 
GAGGGCTTAG CCCTTAAAAA AGCAATCGCT CAATTGCATG GCTTAGATCC CAAGCAAGTT 
TTCTTGGGGA ATGGCTCAGA CGAGGTTCTT GCACATATTT TTGCTGGCTT GCTGAAACAA 
AATAAGCCCG TTCATTTTCC AGATATCACC TATAGCTTTT ATCCGGTTTA TTGCAAACTC 
TTTGGCATTG ATTACAAGAC TATCCCACTA GGAGAGCAGT TCGAGATTAA TGCCAGAGAC 
TATGTATTGC CCAATGGCGG AATTATTTTT CCCAACCCCA ATGCACCTAC TGGTCGCGCA 
ATTGCACGCT CAGAAATTGA GACTTTGCTT TCCAAAAATC TAGATTCAGT TGTAGTGATA 
GATGAAGCCT ATGTGGACTA TGGAACAGAG TCTTGTATTC CTTTATTGCG TGGTGCTAGC 
TGCCCAGAAA ATCTAGTGGT AGTGCACACC CTCTCGAAAT CAAGAGCTCT TGCAGGCTTG 
CGGGTTGGTT TTGCAGTTGG CCACCCAACA CTGATTGAAG GCTTGGAGCG AGTTAAGAAT 
AGCTTTAACT CTTACCCTCT AGGCCGTTTA GCTCAAGCAG GTGCAATCGC CGCAATTGAA 
GATCAAACTC ATCTATTAGA AACCTCAGCA AAAGTAATTC AGACGCGCGA TAGATTAGTA 
AGCCAATTGG ATGCTTTAGG CTTTGACACA TTGCCCTCGA CCGCAAACTT TATTTTTACT 
CGTCATCCAA AGCATGCTGG TGAGTCACTG TATCAAGCCT TGCGGGATCG CGGCATCATC 
GTGCGCCATT TCAAATCTCC ACGTATAGAT GCGTTTTTAC GCATTACGAT CGGCACAGAT 
GAACAAAGCA ACGAGCTTGT CGCTGCCTTA CAAGAAATCC TGAGCTAA
 
Protein sequence
MSRFWSPVVQ TLTPYVPGEQ PQMQRLVKLN TNESPYGPSA KALAAIQSQT NDDLRLYPDP 
EGLALKKAIA QLHGLDPKQV FLGNGSDEVL AHIFAGLLKQ NKPVHFPDIT YSFYPVYCKL 
FGIDYKTIPL GEQFEINARD YVLPNGGIIF PNPNAPTGRA IARSEIETLL SKNLDSVVVI 
DEAYVDYGTE SCIPLLRGAS CPENLVVVHT LSKSRALAGL RVGFAVGHPT LIEGLERVKN 
SFNSYPLGRL AQAGAIAAIE DQTHLLETSA KVIQTRDRLV SQLDALGFDT LPSTANFIFT 
RHPKHAGESL YQALRDRGII VRHFKSPRID AFLRITIGTD EQSNELVAAL QEILS