Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0102 |
Symbol | |
ID | 5053360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 98932 |
End bp | 99684 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470254 |
Product | ABC transporter related |
Protein accession | YP_001154888 |
Protein GI | 145588291 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.85955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCGG CGATCTCACT CAAAAATATT TCTAAGCACT ACGGAGCCCT TCAGGCTTTA GATGATGTCT CTTTGGCAAT TGAGCCAGGA GAGTTTTTTG GGCTTCTAGG CCCTAATGGC GCCGGCAAGA CAACCCTGAT TTCTATCTTG GCTGGCTTGG TTAGGGCTGA TAAAGGACAT GCTGCAATTT TGGGCGCAGA TGTTCAAAAG TCATTTCGTG AGGCACGTCG TATGTTGGGT GTTGTTCCTC AAGAGCTCGT GTTTGACCCA TTTTTCACTG TGCGTGAAAC ATTGCGTTTT CAGTCTGGTT ATTTTGGTAT TCGCAACAAT GATGCTTGGA TCGACGAGAT CTTGGCTAAT CTGGATCTCG CCGGAAAAGC CGATAGCAAT ATGCGCACCC TATCCGGCGG TATGAAGCGT CGGGTGCTTG TTGCTCAGGC CCTAGTTCAT CGCCCACCAG TCATTATTTT GGATGAGCCA ACAGCAGGCG TGGATGTTGA GCTGCGTCAG TCTTTATGGC AATTTATCAG CCGCCTAAAC CAAGATGGGC ATACGATCGT CTTGACTACA CATTATCTAG AAGAAGCAGA AGCTTTATGC CAACGTATTG CGATGCTTAA GCAAGGAAAA ATTGTTGCTC TAGATACCAC CGCTAATTTG CTAACCCGCT ATGGTTCTGT GAAAAAAGAT GGTGAAGGTA AAACGGATTT AGAAGAAGTG TTTGTCAATA TTATGTCTGG GGGCGCGATA TGA
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Protein sequence | MHSAISLKNI SKHYGALQAL DDVSLAIEPG EFFGLLGPNG AGKTTLISIL AGLVRADKGH AAILGADVQK SFREARRMLG VVPQELVFDP FFTVRETLRF QSGYFGIRNN DAWIDEILAN LDLAGKADSN MRTLSGGMKR RVLVAQALVH RPPVIILDEP TAGVDVELRQ SLWQFISRLN QDGHTIVLTT HYLEEAEALC QRIAMLKQGK IVALDTTANL LTRYGSVKKD GEGKTDLEEV FVNIMSGGAI
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