Gene Pnuc_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0102 
Symbol 
ID5053360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp98932 
End bp99684 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content46% 
IMG OID640470254 
ProductABC transporter related 
Protein accessionYP_001154888 
Protein GI145588291 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.85955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCGG CGATCTCACT CAAAAATATT TCTAAGCACT ACGGAGCCCT TCAGGCTTTA 
GATGATGTCT CTTTGGCAAT TGAGCCAGGA GAGTTTTTTG GGCTTCTAGG CCCTAATGGC
GCCGGCAAGA CAACCCTGAT TTCTATCTTG GCTGGCTTGG TTAGGGCTGA TAAAGGACAT
GCTGCAATTT TGGGCGCAGA TGTTCAAAAG TCATTTCGTG AGGCACGTCG TATGTTGGGT
GTTGTTCCTC AAGAGCTCGT GTTTGACCCA TTTTTCACTG TGCGTGAAAC ATTGCGTTTT
CAGTCTGGTT ATTTTGGTAT TCGCAACAAT GATGCTTGGA TCGACGAGAT CTTGGCTAAT
CTGGATCTCG CCGGAAAAGC CGATAGCAAT ATGCGCACCC TATCCGGCGG TATGAAGCGT
CGGGTGCTTG TTGCTCAGGC CCTAGTTCAT CGCCCACCAG TCATTATTTT GGATGAGCCA
ACAGCAGGCG TGGATGTTGA GCTGCGTCAG TCTTTATGGC AATTTATCAG CCGCCTAAAC
CAAGATGGGC ATACGATCGT CTTGACTACA CATTATCTAG AAGAAGCAGA AGCTTTATGC
CAACGTATTG CGATGCTTAA GCAAGGAAAA ATTGTTGCTC TAGATACCAC CGCTAATTTG
CTAACCCGCT ATGGTTCTGT GAAAAAAGAT GGTGAAGGTA AAACGGATTT AGAAGAAGTG
TTTGTCAATA TTATGTCTGG GGGCGCGATA TGA
 
Protein sequence
MHSAISLKNI SKHYGALQAL DDVSLAIEPG EFFGLLGPNG AGKTTLISIL AGLVRADKGH 
AAILGADVQK SFREARRMLG VVPQELVFDP FFTVRETLRF QSGYFGIRNN DAWIDEILAN
LDLAGKADSN MRTLSGGMKR RVLVAQALVH RPPVIILDEP TAGVDVELRQ SLWQFISRLN
QDGHTIVLTT HYLEEAEALC QRIAMLKQGK IVALDTTANL LTRYGSVKKD GEGKTDLEEV
FVNIMSGGAI