| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0099 |
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| Symbol | |
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| ID | 5053279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 97204 |
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| End bp | 97962 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470251 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001154885 |
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| Protein GI | 145588288 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.630225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGCATT TAGGCAGACT TCGCCGAACA GGGGTGCGTT TCCTGTTAGT GGGGTTTACT
GCTCTGATTG TTGGTTGCGC TTCGATACCC GCTGGCGTCG AGCCCTCACC TAATGATCCG
TGGGAGCCTT TTAATCGCTC AGTTTTCGAA TTTAACGAAG GTTTAGATGC GTATTTACTC
AAGCCCGTAG TAGCTGGGTA CCGTTTTGTT TTGCCAGAAT TTATTCGCGA GGGAATCTAT
AACTTTTTTA GTAATTACAA CGATATATAT ACGGCTCTGT ATAACTTGCT GCAAGGTAAG
CCTGGATATG CCTTTAATGA CTTGATGCGA GTTGCAGTAA ATACCACTAT GGGCTTAGGG
GGTCTTCTAG ATCTTGCAAC CCCTGGTGGC CTTGAAAAGC ATAAAGAAGA CTGGGGTCAG
ACTTTGGGTG TATGGGGTGT ACCTGCAGGC CCATATGTAG TATTACCTTT TTTTGGCCCA
AGCAATGTGC GCGATACCTT TGGCACTGCT GCTGATTTAG AGTCAGACTA CTTATTTAGA
TTGCTACCAA ACGTAGCTCT TAGAAATAGT TTGACTGGCT TGCGTGTTGT GAATACCCGA
AACACCTATT ACGAGGCAGG TGACTTATTG GATGGCGCCG CTATTGATAA GTACAGCTTT
ATGCGGGATG CTTACATTCA AAGACGTCAG TACCAAATCA ATGAGGGTAG AGACGATGAA
GAGCCTCCAA TGCCCCCGTA TGAGAATGGT TACGAGTAA
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| Protein sequence | MLHLGRLRRT GVRFLLVGFT ALIVGCASIP AGVEPSPNDP WEPFNRSVFE FNEGLDAYLL
KPVVAGYRFV LPEFIREGIY NFFSNYNDIY TALYNLLQGK PGYAFNDLMR VAVNTTMGLG
GLLDLATPGG LEKHKEDWGQ TLGVWGVPAG PYVVLPFFGP SNVRDTFGTA ADLESDYLFR
LLPNVALRNS LTGLRVVNTR NTYYEAGDLL DGAAIDKYSF MRDAYIQRRQ YQINEGRDDE
EPPMPPYENG YE
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