Gene Pnuc_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0091 
Symbol 
ID5052112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp84714 
End bp85406 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID640470243 
Producthypothetical protein 
Protein accessionYP_001154877 
Protein GI145588280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0436132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCAC GCCATATTTC CCCCCAATCA TTTGACTCTA TCTTGAGCGA ACTTGGCGAC 
GACCCCGCCA TCCCTGATCC ACATGGAATT CGAAAAAGAA GCGCACCTAA CCCACCACCC 
TTAAACCAGC CAAGCCCCTC AAAAGCCGCC GCCAATTTTG AGGGGTTCGC AGATAAAAAC 
CCAGTTGCGC GCCTTAAAAA AATAGGCCCC CTTCTTGGCT TCGGAGGTGC CTATATTGCT 
CTTGGTGTCG CTTTTTTAAT GGCCTATAAC TCTGTCCAAT CAAGCAACGA TTCCACTCAA 
ATTGATTCTC AAAGGCAAAT TTCTGAGATT AAAAAGGAAC TGGCTGCTCT GCAAAATGAA 
TTGATAGAAA TAGAAGAGTC TATATATTCA TCAATGGATT TATTGGAAGT AAGTATTCAC 
TCTTTAAAGC AAATTAAGAC CAATCCAAAG ACGATTAGCA AGCCCAAAGT CATTCCACAT 
GAAGCTGAAT TGCGCAATTG GCGTTATTTG GGCTTTAGTC AAACAAGAGG ATCTCATCAG 
GCATTTTTTC ATAATGGTAA AGCTAGCGTG ATGGTTGAAA AAGGGGCTCT TGTACTAGGG 
GATTGGGTGC TCAATCATTT CTCCAAAGAG TCCGTCACAC TCACTCACCC CCAAGGTAAA 
TCGCTCATTC TGAAGCCCTC AAAAAGCGAG TGA
 
Protein sequence
MPSRHISPQS FDSILSELGD DPAIPDPHGI RKRSAPNPPP LNQPSPSKAA ANFEGFADKN 
PVARLKKIGP LLGFGGAYIA LGVAFLMAYN SVQSSNDSTQ IDSQRQISEI KKELAALQNE 
LIEIEESIYS SMDLLEVSIH SLKQIKTNPK TISKPKVIPH EAELRNWRYL GFSQTRGSHQ 
AFFHNGKASV MVEKGALVLG DWVLNHFSKE SVTLTHPQGK SLILKPSKSE