Gene Pnuc_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0085 
Symbol 
ID5053688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp79202 
End bp79942 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content49% 
IMG OID640470237 
Productcytochrome c553-like protein 
Protein accessionYP_001154871 
Protein GI145588274 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCAAA CCTCCCAAAT CTCCAAATTC ACTAGCTTGC GTGCTGGTTT TGCAGCGATC 
TCTATTTTCG CTCTCACTAG CATTTCTGGT CTAGCTATCG CCAATGATGC GCCTGCTGCT 
GCACCAGCTG CAGAGGCTCC AGCAGCAGAG GCCAAGCCAG TCGTACCGGG CAAGCCAAAG 
GCTGATCCTG CCGCTGGTGA AGCCTTATAT TCTGCGGGTG ATGCAACTCG TGGCGTGACC 
GCTTGTATTA CTTGCCATGG ACCTAAAGGT CAAAGTGCAG TAGGTACATG GCCTAAGCTT 
TCTGCGCAGC ATGCTGCTTA CATCACTAAG CAATTGAAAA ATTTCAAAGA AGGTACGCGC 
GCTAATGCAG TGATGATGGG TATGGCTGCC ACTTTGACTG AACAAGACAT GATCAATATT 
TCATCTTTCT TGGTAAAGCA ACCAGCTTCA CAAGGAGTGG CTCAAAACAA AGACACTATT 
GAGCTGGGTC AAAGTATTTA TCGTGGTGGT ATTGCCTCTA AAGCTGTTCC GGCTTGCGCG 
GCTTGCCATA GTCCTAATGG TGCTGGCCTT CCTTCGCAAT ATCCACGCTT AGGCGGTCAG 
TGGGCTGACT ACACCTATGC ACAGTTAGTA GCATTTAGTA ATGGCACTCG CAAGAACGGC 
CCAATGATGA CTACGATTGC TGGCAAGATG TCAGATGCAG AAATGAAAGC AGTTTCTGAC 
TATATCGCCG GATTGCATTA A
 
Protein sequence
MRQTSQISKF TSLRAGFAAI SIFALTSISG LAIANDAPAA APAAEAPAAE AKPVVPGKPK 
ADPAAGEALY SAGDATRGVT ACITCHGPKG QSAVGTWPKL SAQHAAYITK QLKNFKEGTR 
ANAVMMGMAA TLTEQDMINI SSFLVKQPAS QGVAQNKDTI ELGQSIYRGG IASKAVPACA 
ACHSPNGAGL PSQYPRLGGQ WADYTYAQLV AFSNGTRKNG PMMTTIAGKM SDAEMKAVSD 
YIAGLH