Gene Pnuc_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0083 
Symbol 
ID5052432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp77418 
End bp78443 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content46% 
IMG OID640470235 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001154869 
Protein GI145588272 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGA AATCACCAGC TAATTCTTTA TTGAACTTCC CGGCTCACCG CCCTCGCCGT 
ATGCGCCGAG ATGATTGGTC TCGTCGCCTG ATGCAAGAAA ACAGTGTGTC TGCAAGCGAT
CTTATTTATC CAGTATTTCT ACTGGAAGGG TCCGGGCAAT CGCAAGCTGT TGCCTCTATG
CCAGGAGTCA ATCGCGTTTC CTTAGATCTA TTAATTCCAG TTGCTCAAGA ATGTGTTGAT
TTGGGCATAC CAGTATTGGC ACTTTTCCCT GTGATTGATG CTGCCTTAAA AACAGCTGAT
GGCAAAGAAG CTTTTAACGC AAATGGCCTC ATTCCAACTG CTGTTCGAGA GCTCAAAAAA
CGATTCCCCA ATTTAGGCAT CATGACCGAT GTCGCGCTCG ATCCCTACAC CAGCCATGGC
CAAGATGGAG TACTGGATGA TCAAGGTCGC ATTTTGAATG ATGAGACGAC CGCTATTTTG
GTTCAACAAG CAATTGCTCA AGCGCAAGCT GGTGTCGACA TCGTTGCACC CTCAGACATG
ATGGATGGTC GCATTGGAAA AATTCGTGAG GCCCTTGAAC AAAAGAATTT AATTCACACT
CGCATCATGG CTTATTCAGC TAAATATGCC TCCGCGTTTT ATGGTCCATT TCGTGATGCA
GTAGGGTCTT CCAAAAATTT AGGTAAGGCA GATAAAAAAA CGTATCAAAT GGATTGTGCT
AACGGCGATG AAGCCTTGCG TGAAGTAGCG CTCGATATCA GCGAAGGTGC CGATATGGTG
ATGGTCAAGC CGGGTATGCC TTATTTAGAT ATCGTACGTA GAGTGAGGGA AGAGTTTGAT
TACCCCACTT ATGCCTACCA AGTCAGCGGT GAATACGCCA TGCTTAAAGC TGCCGCACAA
AATGGGTGGC TTGATCACGA TGCAGTCATG ATGGAATCTC TAATCGCCTT TAAACGCGCA
GGGGCTGATG GCGTTTTGAC CTACTTTGCT CTAGATGCAG CCAGATTAAT TCGGTCAAAT
AGCTAG
 
Protein sequence
MKTKSPANSL LNFPAHRPRR MRRDDWSRRL MQENSVSASD LIYPVFLLEG SGQSQAVASM 
PGVNRVSLDL LIPVAQECVD LGIPVLALFP VIDAALKTAD GKEAFNANGL IPTAVRELKK
RFPNLGIMTD VALDPYTSHG QDGVLDDQGR ILNDETTAIL VQQAIAQAQA GVDIVAPSDM
MDGRIGKIRE ALEQKNLIHT RIMAYSAKYA SAFYGPFRDA VGSSKNLGKA DKKTYQMDCA
NGDEALREVA LDISEGADMV MVKPGMPYLD IVRRVREEFD YPTYAYQVSG EYAMLKAAAQ
NGWLDHDAVM MESLIAFKRA GADGVLTYFA LDAARLIRSN S