Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0065 |
Symbol | |
ID | 5053291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 66726 |
End bp | 67268 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640470217 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001154851 |
Protein GI | 145588254 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000146206 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACAC GTTTTCAAGA ACACTATCAA GAAAAAGTCG TTGCCGACTT GATTACCAAA TTTGGTTACA AGTCAGTAAT GGAAGTTCCA CGCATCACTA AAGTTACCCT AAACATGGGT TTGGGCGATG CCGTGAACGA TAAGAAAATT ATCGAAAATG CAGTTGGTGA TTTAACTAAG GTTGCCGGTC AAAAGCCAGT TGTGACTAAA GCTAAAAAAG CGATTGCAGG TTTCAAAATT CGTCAAGGCT ACCCAATCGG CGCCATGGTG ACATTGCGCG GTCAGCGCAT GTACGAATTC TTGGATCGTT TCGTTACTGT TGCATTGCCA CGCGTACGTG ACTTCCGTGG AATCTCTGGT AAAGCATTTG ACGGCCGTGG TAACTACAAC ATCGGCGTTA AAGAACAGAT CATTTTTCCT GAAATCGAAT ACGACAAAAT TGATGCCCTC CGCGGTCTCA ATATCAGTAT TACGACGACT GCTAAAACCG ATGAAGAAGC AAAAGCTTTG TTGGCAGCAT TCAAATTCCC TTTCCGCAAT TAA
|
Protein sequence | MSTRFQEHYQ EKVVADLITK FGYKSVMEVP RITKVTLNMG LGDAVNDKKI IENAVGDLTK VAGQKPVVTK AKKAIAGFKI RQGYPIGAMV TLRGQRMYEF LDRFVTVALP RVRDFRGISG KAFDGRGNYN IGVKEQIIFP EIEYDKIDAL RGLNISITTT AKTDEEAKAL LAAFKFPFRN
|
| |